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SNX12
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:33.7 nTPM
HPA:33.7 nTPM
GTEx:27.1 nTPM
FANTOM5:34.3 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:42.9 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB070423
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.7
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1898 Male, age 80, left hemisphere 37.0
2529 Female, age 94, left hemisphere 34.5
2621 Female, age 67, right hemisphere 33.0
1911 Female, age 85, right hemisphere 29.9
2148 Female, age 91, left hemisphere 29.7
1855 Male, age 76, left hemisphere 29.4
Dentate gyrus
nTPM: 32.4
2530 Female, age 94, left hemisphere 35.2
1927 Female, age 91, both hemispheres 34.4
2010 Male, age 76, both hemispheres 31.7
2246 Female, age 85, both hemispheres 31.7
2531 Female, age 67, both hemispheres 31.3
2528 Male, age 74, both hemispheres 29.9
Entorhinal gyrus
nTPM: 32.7
2764 Male, age 80, right hemisphere 34.6
2686 Male, age 75, right hemisphere 33.0
1787 Male, age 76, left hemisphere 32.6
2117 Female, age 91, right hemisphere 32.6
1938 Female, age 85, left hemisphere 32.3
2613 Female, age 94, left hemisphere 31.0
Hippocampus, CA1
nTPM: 32.3
2749 Male, age 80, left hemisphere 38.8
2527 Male, age 74, both hemispheres 32.3
1873 Female, age 85, both hemispheres 30.8
2045 Male, age 76, both hemispheres 30.1
2082 Female, age 91, right hemisphere 29.8
Hippocampus, CA2
nTPM: 31.8
1892 Male, age 76, both hemispheres 35.1
1963 Male, age 80, left hemisphere 33.5
2437 Female, age 94, left hemisphere 32.2
2113 Female, age 91, right hemisphere 31.0
2249 Male, age 74, both hemispheres 29.7
1940 Female, age 85, left hemisphere 29.2
Hippocampus, CA3
nTPM: 31.4
2861 Female, age 67, both hemispheres 32.9
2137 Male, age 80, left hemisphere 32.3
1891 Female, age 85, both hemispheres 32.0
1867 Male, age 76, both hemispheres 31.0
2620 Female, age 94, left hemisphere 30.2
2436 Male, age 74, both hemispheres 30.0
Parahippocampal cortex
nTPM: 31.9
1850 Male, age 80, both hemispheres 35.8
2245 Female, age 91, both hemispheres 33.3
2532 Female, age 72, left hemisphere 33.1
1933 Female, age 85, both hemispheres 32.8
1990 Female, age 91, right hemisphere 32.1
2692 Male, age 74, both hemispheres 31.6
2018 Male, age 76, both hemispheres 30.8
2693 Female, age 94, both hemispheres 30.8
2622 Female, age 67, right hemisphere 29.7
2250 Female, age 67, right hemisphere 29.5
Perirhinal gyrus
nTPM: 33.7
1794 Male, age 80, right hemisphere 38.5
1847 Female, age 91, left hemisphere 34.9
1841 Female, age 85, right hemisphere 32.9
2848 Male, age 76, right hemisphere 31.6
2521 Female, age 94, right hemisphere 30.4
Subiculum
nTPM: 31.7
1901 Male, age 80, both hemispheres 32.9
2438 Female, age 94, left hemisphere 32.7
1977 Female, age 85, both hemispheres 32.5
2619 Male, age 74, both hemispheres 32.2
2729 Female, age 91, right hemisphere 30.0
2042 Male, age 76, both hemispheres 29.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.1
Samples: 197

Max nTPM: 40.7
Min nTPM: 16.9
Std nTPM: 4.5
Median nTPM: 26.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 40.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 38.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 38.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 38.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 37.7
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 37.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 37.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 37.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 36.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 36.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 36.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.3
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 31.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.3
Samples: 4

Max nTPM: 41.5
Min nTPM: 29.9
Sample A Female 41.5
Sample B Female 38.8
Sample C Male 29.9
Sample D Male 30.9
Entorhinal cortex
nTPM: 31.5
Samples: 4

Max nTPM: 33.1
Min nTPM: 29.9
Sample A Female 31.1
Sample B Female 33.1
Sample C Male 31.8
Sample D Male 29.9
Subiculum
nTPM: 29.6
Samples: 4

Max nTPM: 34.4
Min nTPM: 26.6
Sample A Female 34.4
Sample B Female 28.9
Sample C Male 28.3
Sample D Male 26.6
Ventral hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 38.6
Min nTPM: 28.3
Sample A Female 34.2
Sample B Female 28.3
Sample C Male 33.1
Sample D Male 38.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.0
Samples: 4

Max nTPM: 42.9
Min nTPM: 35.3
Sample A Male 35.3
Sample B Male 35.8
Sample C Female 38.0
Sample D Female 42.9
Hippocampal formation
nTPM: 42.9
Samples: 4

Max nTPM: 45.7
Min nTPM: 36.7
Sample A Male 44.3
Sample B Male 44.7
Sample C Female 45.7
Sample D Female 36.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
68269270 Antisense, RP_041208_02_A04, Mouse strain C57BL/6J (56 days, male) 3.7

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The Human Protein Atlas

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