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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:7.6 nTPM
HPA:7.6 nTPM
GTEx:16.3 nTPM
FANTOM5:106.1 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:10.1 nTPM
Allen mouse:1.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 7.6
Sample id Sample description nTPM
Hippocampus
nTPM: 6.9
1898 Male, age 80, left hemisphere 8.1
1855 Male, age 76, left hemisphere 7.4
1911 Female, age 85, right hemisphere 7.1
2621 Female, age 67, right hemisphere 7.0
2148 Female, age 91, left hemisphere 6.7
2529 Female, age 94, left hemisphere 5.1
Dentate gyrus
nTPM: 7.0
1927 Female, age 91, both hemispheres 9.0
2010 Male, age 76, both hemispheres 7.5
2246 Female, age 85, both hemispheres 7.2
2530 Female, age 94, left hemisphere 6.4
2528 Male, age 74, both hemispheres 6.0
2531 Female, age 67, both hemispheres 5.8
Entorhinal gyrus
nTPM: 6.6
1938 Female, age 85, left hemisphere 8.7
1787 Male, age 76, left hemisphere 6.6
2117 Female, age 91, right hemisphere 6.6
2764 Male, age 80, right hemisphere 6.2
2613 Female, age 94, left hemisphere 5.8
2686 Male, age 75, right hemisphere 5.4
Hippocampus, CA1
nTPM: 7.5
1873 Female, age 85, both hemispheres 9.5
2749 Male, age 80, left hemisphere 9.3
2045 Male, age 76, both hemispheres 7.5
2527 Male, age 74, both hemispheres 5.8
2082 Female, age 91, right hemisphere 5.2
Hippocampus, CA2
nTPM: 6.6
1892 Male, age 76, both hemispheres 9.1
2249 Male, age 74, both hemispheres 6.8
1963 Male, age 80, left hemisphere 6.6
1940 Female, age 85, left hemisphere 5.9
2113 Female, age 91, right hemisphere 5.7
2437 Female, age 94, left hemisphere 5.4
Hippocampus, CA3
nTPM: 7.2
1867 Male, age 76, both hemispheres 8.7
2137 Male, age 80, left hemisphere 8.4
1891 Female, age 85, both hemispheres 7.5
2436 Male, age 74, both hemispheres 6.5
2620 Female, age 94, left hemisphere 6.2
2861 Female, age 67, both hemispheres 6.0
Parahippocampal cortex
nTPM: 6.7
1933 Female, age 85, both hemispheres 7.9
1990 Female, age 91, right hemisphere 7.4
1850 Male, age 80, both hemispheres 7.2
2245 Female, age 91, both hemispheres 7.0
2250 Female, age 67, right hemisphere 7.0
2693 Female, age 94, both hemispheres 6.6
2018 Male, age 76, both hemispheres 6.2
2692 Male, age 74, both hemispheres 6.2
2532 Female, age 72, left hemisphere 6.0
2622 Female, age 67, right hemisphere 5.9
Perirhinal gyrus
nTPM: 7.6
1841 Female, age 85, right hemisphere 8.8
1847 Female, age 91, left hemisphere 7.6
2848 Male, age 76, right hemisphere 7.4
1794 Male, age 80, right hemisphere 7.3
2521 Female, age 94, right hemisphere 7.1
Subiculum
nTPM: 6.4
1977 Female, age 85, both hemispheres 7.3
2042 Male, age 76, both hemispheres 7.0
1901 Male, age 80, both hemispheres 6.9
2729 Female, age 91, right hemisphere 5.9
2438 Female, age 94, left hemisphere 5.7
2619 Male, age 74, both hemispheres 5.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.3
Samples: 197

Max nTPM: 30.3
Min nTPM: 10.5
Std nTPM: 3.1
Median nTPM: 16.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 30.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 25.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.5
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 24.9
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 24.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 23.8
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 22.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 22.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 22.0
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 21.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 21.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.1
FF:10169-103B7 60 years, female 121.3
FF:10153-102I9 76 years, female 90.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 23.8
Min nTPM: 13.7
Sample A Female 23.8
Sample B Female 16.7
Sample C Male 21.7
Sample D Male 13.7
Entorhinal cortex
nTPM: 16.7
Samples: 4

Max nTPM: 18.0
Min nTPM: 13.7
Sample A Female 17.6
Sample B Female 17.3
Sample C Male 18.0
Sample D Male 13.7
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 22.5
Min nTPM: 16.7
Sample A Female 22.5
Sample B Female 16.7
Sample C Male 18.7
Sample D Male 18.0
Ventral hippocampus
nTPM: 17.2
Samples: 4

Max nTPM: 20.6
Min nTPM: 15.0
Sample A Female 20.6
Sample B Female 15.0
Sample C Male 17.1
Sample D Male 16.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 12.3
Min nTPM: 9.0
Sample A Male 9.2
Sample B Male 12.3
Sample C Female 9.8
Sample D Female 9.0
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.5
Sample A Male 8.4
Sample B Male 8.3
Sample C Female 6.5
Sample D Female 7.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.5
68545923 Antisense, RP_050120_01_G02, Mouse strain C57BL/6J (56 days, male) 1.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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