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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:23.6 nTPM
HPA:23.6 nTPM
GTEx:22.3 nTPM
FANTOM5:75.4 Scaled Tags Per Million
Pig:49.4 nTPM
Mouse:40.7 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046656
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.6
Sample id Sample description nTPM
Hippocampus
nTPM: 9.2
2621 Female, age 67, right hemisphere 16.8
1898 Male, age 80, left hemisphere 10.2
1855 Male, age 76, left hemisphere 8.5
2148 Female, age 91, left hemisphere 8.0
1911 Female, age 85, right hemisphere 6.4
2529 Female, age 94, left hemisphere 5.5
Dentate gyrus
nTPM: 5.5
1927 Female, age 91, both hemispheres 16.5
2531 Female, age 67, both hemispheres 7.0
2530 Female, age 94, left hemisphere 5.3
2246 Female, age 85, both hemispheres 4.0
2010 Male, age 76, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
Entorhinal gyrus
nTPM: 21.6
2613 Female, age 94, left hemisphere 35.8
2764 Male, age 80, right hemisphere 25.8
2686 Male, age 75, right hemisphere 24.4
1787 Male, age 76, left hemisphere 18.2
1938 Female, age 85, left hemisphere 16.2
2117 Female, age 91, right hemisphere 9.5
Hippocampus, CA1
nTPM: 10.5
2749 Male, age 80, left hemisphere 25.0
2527 Male, age 74, both hemispheres 8.6
2082 Female, age 91, right hemisphere 6.7
1873 Female, age 85, both hemispheres 6.2
2045 Male, age 76, both hemispheres 6.2
Hippocampus, CA2
nTPM: 11.4
1963 Male, age 80, left hemisphere 33.3
1892 Male, age 76, both hemispheres 16.4
2437 Female, age 94, left hemisphere 11.1
2113 Female, age 91, right hemisphere 7.9
1940 Female, age 85, left hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 10.7
2137 Male, age 80, left hemisphere 31.8
2861 Female, age 67, both hemispheres 16.5
1867 Male, age 76, both hemispheres 7.5
2620 Female, age 94, left hemisphere 5.1
1891 Female, age 85, both hemispheres 3.2
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 19.5
2245 Female, age 91, both hemispheres 28.7
2693 Female, age 94, both hemispheres 28.0
2622 Female, age 67, right hemisphere 26.5
1850 Male, age 80, both hemispheres 23.7
1990 Female, age 91, right hemisphere 22.4
2250 Female, age 67, right hemisphere 17.7
2018 Male, age 76, both hemispheres 14.8
2532 Female, age 72, left hemisphere 14.7
1933 Female, age 85, both hemispheres 12.1
2692 Male, age 74, both hemispheres 6.3
Perirhinal gyrus
nTPM: 23.6
1847 Female, age 91, left hemisphere 33.0
2848 Male, age 76, right hemisphere 23.3
1794 Male, age 80, right hemisphere 22.7
2521 Female, age 94, right hemisphere 22.3
1841 Female, age 85, right hemisphere 16.5
Subiculum
nTPM: 5.4
1977 Female, age 85, both hemispheres 13.5
1901 Male, age 80, both hemispheres 8.3
2619 Male, age 74, both hemispheres 7.7
2042 Male, age 76, both hemispheres 1.8
2438 Female, age 94, left hemisphere 1.2
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 81.2
Min nTPM: 2.1
Std nTPM: 14.1
Median nTPM: 19.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 81.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 78.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 74.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 73.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 70.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 63.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 61.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 57.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 53.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 51.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 75.4
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 72.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 49.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.3
Samples: 4

Max nTPM: 29.1
Min nTPM: 18.5
Sample A Female 23.6
Sample B Female 21.9
Sample C Male 29.1
Sample D Male 18.5
Entorhinal cortex
nTPM: 49.4
Samples: 4

Max nTPM: 63.2
Min nTPM: 41.5
Sample A Female 41.5
Sample B Female 50.3
Sample C Male 63.2
Sample D Male 42.5
Subiculum
nTPM: 41.0
Samples: 4

Max nTPM: 48.9
Min nTPM: 35.9
Sample A Female 48.9
Sample B Female 39.9
Sample C Male 39.3
Sample D Male 35.9
Ventral hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 37.9
Min nTPM: 14.5
Sample A Female 14.5
Sample B Female 21.1
Sample C Male 26.5
Sample D Male 37.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.7
Samples: 4

Max nTPM: 49.6
Min nTPM: 35.3
Sample A Male 39.0
Sample B Male 35.3
Sample C Female 38.7
Sample D Female 49.6
Hippocampal formation
nTPM: 22.7
Samples: 4

Max nTPM: 28.7
Min nTPM: 17.6
Sample A Male 28.7
Sample B Male 20.8
Sample C Female 17.6
Sample D Female 23.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69873732 Antisense, RP_050512_01_H04, Mouse strain C57BL/6J (56 days, male) 7.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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