ABOUTMENU
HELP
NEWS
STOM
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:90.5 nTPM
HPA:90.5 nTPM
GTEx:80.7 nTPM
FANTOM5:181.3 Scaled Tags Per Million
Pig:9.8 nTPM
Mouse:12.7 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010961Antibody HPA011419
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 90.5
Sample id Sample description nTPM
Hippocampus
nTPM: 90.5
2529 Female, age 94, left hemisphere 101.3
1855 Male, age 76, left hemisphere 94.2
1911 Female, age 85, right hemisphere 92.2
1898 Male, age 80, left hemisphere 90.0
2148 Female, age 91, left hemisphere 83.4
2621 Female, age 67, right hemisphere 81.7
Dentate gyrus
nTPM: 82.8
2528 Male, age 74, both hemispheres 92.7
2246 Female, age 85, both hemispheres 88.1
2010 Male, age 76, both hemispheres 86.7
2530 Female, age 94, left hemisphere 80.7
1927 Female, age 91, both hemispheres 75.2
2531 Female, age 67, both hemispheres 73.4
Entorhinal gyrus
nTPM: 78.3
2117 Female, age 91, right hemisphere 91.0
1938 Female, age 85, left hemisphere 84.6
1787 Male, age 76, left hemisphere 80.2
2764 Male, age 80, right hemisphere 72.4
2686 Male, age 75, right hemisphere 71.6
2613 Female, age 94, left hemisphere 70.0
Hippocampus, CA1
nTPM: 84.6
2527 Male, age 74, both hemispheres 94.6
1873 Female, age 85, both hemispheres 88.9
2082 Female, age 91, right hemisphere 88.9
2045 Male, age 76, both hemispheres 82.7
2749 Male, age 80, left hemisphere 68.1
Hippocampus, CA2
nTPM: 84.7
2113 Female, age 91, right hemisphere 95.7
2249 Male, age 74, both hemispheres 92.7
1940 Female, age 85, left hemisphere 83.6
2437 Female, age 94, left hemisphere 82.1
1963 Male, age 80, left hemisphere 81.7
1892 Male, age 76, both hemispheres 72.1
Hippocampus, CA3
nTPM: 83.6
1891 Female, age 85, both hemispheres 91.6
2436 Male, age 74, both hemispheres 91.6
2861 Female, age 67, both hemispheres 82.7
1867 Male, age 76, both hemispheres 80.2
2620 Female, age 94, left hemisphere 78.9
2137 Male, age 80, left hemisphere 76.7
Parahippocampal cortex
nTPM: 84.0
2250 Female, age 67, right hemisphere 99.6
2018 Male, age 76, both hemispheres 88.4
1933 Female, age 85, both hemispheres 86.7
2692 Male, age 74, both hemispheres 86.5
1990 Female, age 91, right hemisphere 81.8
1850 Male, age 80, both hemispheres 81.3
2622 Female, age 67, right hemisphere 81.1
2245 Female, age 91, both hemispheres 80.6
2532 Female, age 72, left hemisphere 78.7
2693 Female, age 94, both hemispheres 75.0
Perirhinal gyrus
nTPM: 80.1
1847 Female, age 91, left hemisphere 85.9
1841 Female, age 85, right hemisphere 83.3
2521 Female, age 94, right hemisphere 81.5
1794 Male, age 80, right hemisphere 77.9
2848 Male, age 76, right hemisphere 71.9
Subiculum
nTPM: 86.7
2729 Female, age 91, right hemisphere 97.1
2619 Male, age 74, both hemispheres 90.7
2042 Male, age 76, both hemispheres 88.2
2438 Female, age 94, left hemisphere 85.8
1977 Female, age 85, both hemispheres 79.8
1901 Male, age 80, both hemispheres 78.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 80.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.7
Samples: 197

Max nTPM: 225.8
Min nTPM: 26.8
Std nTPM: 37.1
Median nTPM: 73.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 225.8
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 216.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 207.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 205.2
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 159.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 156.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 156.4
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 153.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 152.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 151.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 147.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 181.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 181.3
FF:10153-102I9 76 years, female 184.8
FF:10169-103B7 60 years, female 177.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.7
Samples: 4

Max nTPM: 11.3
Min nTPM: 7.2
Sample A Female 11.3
Sample B Female 9.2
Sample C Male 10.9
Sample D Male 7.2
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 11.3
Min nTPM: 5.6
Sample A Female 8.9
Sample B Female 8.9
Sample C Male 11.3
Sample D Male 5.6
Subiculum
nTPM: 9.8
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.6
Sample A Female 9.9
Sample B Female 8.6
Sample C Male 10.4
Sample D Male 10.2
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 12.8
Min nTPM: 7.2
Sample A Female 9.1
Sample B Female 8.1
Sample C Male 12.8
Sample D Male 7.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 14.0
Min nTPM: 11.6
Sample A Male 11.6
Sample B Male 12.0
Sample C Female 13.3
Sample D Female 14.0
Hippocampal formation
nTPM: 10.9
Samples: 4

Max nTPM: 12.6
Min nTPM: 8.4
Sample A Male 12.6
Sample B Male 11.1
Sample C Female 8.4
Sample D Female 11.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
69080003 Antisense, RP_050324_01_C03, Mouse strain C57BL/6J (56 days, male) 12.1
71919254 Antisense, RP_051012_02_C06, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.