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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:21.2 nTPM
HPA:21.2 nTPM
GTEx:21.5 nTPM
FANTOM5:40.7 Scaled Tags Per Million
Mouse:28.9 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047945
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.2
Sample id Sample description nTPM
Hippocampus
nTPM: 18.8
1898 Male, age 80, left hemisphere 20.0
2529 Female, age 94, left hemisphere 19.4
2621 Female, age 67, right hemisphere 19.1
1855 Male, age 76, left hemisphere 18.7
2148 Female, age 91, left hemisphere 18.4
1911 Female, age 85, right hemisphere 17.4
Dentate gyrus
nTPM: 18.9
2531 Female, age 67, both hemispheres 19.9
2530 Female, age 94, left hemisphere 19.5
2528 Male, age 74, both hemispheres 19.1
2010 Male, age 76, both hemispheres 19.0
2246 Female, age 85, both hemispheres 18.3
1927 Female, age 91, both hemispheres 17.4
Entorhinal gyrus
nTPM: 20.3
1787 Male, age 76, left hemisphere 21.9
1938 Female, age 85, left hemisphere 20.5
2117 Female, age 91, right hemisphere 20.5
2764 Male, age 80, right hemisphere 19.8
2686 Male, age 75, right hemisphere 19.6
2613 Female, age 94, left hemisphere 19.5
Hippocampus, CA1
nTPM: 18.9
2749 Male, age 80, left hemisphere 19.9
2527 Male, age 74, both hemispheres 19.2
2045 Male, age 76, both hemispheres 19.1
1873 Female, age 85, both hemispheres 18.2
2082 Female, age 91, right hemisphere 18.0
Hippocampus, CA2
nTPM: 19.0
1892 Male, age 76, both hemispheres 19.8
2249 Male, age 74, both hemispheres 19.3
1940 Female, age 85, left hemisphere 19.0
2113 Female, age 91, right hemisphere 18.9
2437 Female, age 94, left hemisphere 18.7
1963 Male, age 80, left hemisphere 18.2
Hippocampus, CA3
nTPM: 18.9
1867 Male, age 76, both hemispheres 19.5
2137 Male, age 80, left hemisphere 19.5
2620 Female, age 94, left hemisphere 19.0
1891 Female, age 85, both hemispheres 18.8
2861 Female, age 67, both hemispheres 18.4
2436 Male, age 74, both hemispheres 18.0
Parahippocampal cortex
nTPM: 20.0
1850 Male, age 80, both hemispheres 21.2
2245 Female, age 91, both hemispheres 20.6
2532 Female, age 72, left hemisphere 20.4
2018 Male, age 76, both hemispheres 20.2
1990 Female, age 91, right hemisphere 20.1
2250 Female, age 67, right hemisphere 20.0
2622 Female, age 67, right hemisphere 19.7
1933 Female, age 85, both hemispheres 19.6
2693 Female, age 94, both hemispheres 19.3
2692 Male, age 74, both hemispheres 18.7
Perirhinal gyrus
nTPM: 21.2
1794 Male, age 80, right hemisphere 22.6
2848 Male, age 76, right hemisphere 21.7
1841 Female, age 85, right hemisphere 21.1
1847 Female, age 91, left hemisphere 20.4
2521 Female, age 94, right hemisphere 20.3
Subiculum
nTPM: 19.2
1977 Female, age 85, both hemispheres 20.3
2619 Male, age 74, both hemispheres 19.7
2438 Female, age 94, left hemisphere 19.3
1901 Male, age 80, both hemispheres 18.9
2042 Male, age 76, both hemispheres 18.7
2729 Female, age 91, right hemisphere 18.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.5
Samples: 197

Max nTPM: 36.0
Min nTPM: 14.9
Std nTPM: 3.9
Median nTPM: 20.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 36.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 35.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 33.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 33.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 32.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 31.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 30.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 30.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 29.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 29.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.7
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 40.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.9
Samples: 4

Max nTPM: 27.2
Min nTPM: 22.3
Sample A Male 26.8
Sample B Male 22.3
Sample C Female 27.2
Sample D Female 23.3
Hippocampal formation
nTPM: 28.9
Samples: 4

Max nTPM: 30.1
Min nTPM: 27.6
Sample A Male 30.1
Sample B Male 28.7
Sample C Female 29.3
Sample D Female 27.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
68117983 Antisense, RP_040929_01_G12, Mouse strain C57BL/6J (56 days, male) 7.7
70813383 Antisense, RP_050712_03_H03, Mouse strain C57BL/6J (56 days, male) 0.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.