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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:31.0 nTPM
HPA:31.0 nTPM
GTEx:60.3 nTPM
FANTOM5:12.0 Scaled Tags Per Million
Pig:28.5 nTPM
Mouse:65.6 nTPM
Allen mouse:5.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033946
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.0
Sample id Sample description nTPM
Hippocampus
nTPM: 30.6
1898 Male, age 80, left hemisphere 31.6
2529 Female, age 94, left hemisphere 31.5
2148 Female, age 91, left hemisphere 30.4
1855 Male, age 76, left hemisphere 30.3
2621 Female, age 67, right hemisphere 30.0
1911 Female, age 85, right hemisphere 29.8
Dentate gyrus
nTPM: 30.3
2530 Female, age 94, left hemisphere 31.5
2010 Male, age 76, both hemispheres 30.8
2528 Male, age 74, both hemispheres 30.6
1927 Female, age 91, both hemispheres 30.4
2531 Female, age 67, both hemispheres 29.4
2246 Female, age 85, both hemispheres 29.2
Entorhinal gyrus
nTPM: 30.6
2117 Female, age 91, right hemisphere 31.0
1938 Female, age 85, left hemisphere 30.8
2764 Male, age 80, right hemisphere 30.8
2686 Male, age 75, right hemisphere 30.7
1787 Male, age 76, left hemisphere 30.1
2613 Female, age 94, left hemisphere 30.1
Hippocampus, CA1
nTPM: 30.6
2749 Male, age 80, left hemisphere 32.2
1873 Female, age 85, both hemispheres 30.5
2527 Male, age 74, both hemispheres 30.4
2082 Female, age 91, right hemisphere 30.1
2045 Male, age 76, both hemispheres 29.7
Hippocampus, CA2
nTPM: 31.0
1963 Male, age 80, left hemisphere 32.7
2249 Male, age 74, both hemispheres 31.3
2437 Female, age 94, left hemisphere 30.8
1892 Male, age 76, both hemispheres 30.5
1940 Female, age 85, left hemisphere 30.4
2113 Female, age 91, right hemisphere 30.4
Hippocampus, CA3
nTPM: 30.5
2436 Male, age 74, both hemispheres 31.5
2137 Male, age 80, left hemisphere 30.9
1867 Male, age 76, both hemispheres 30.8
2861 Female, age 67, both hemispheres 30.6
1891 Female, age 85, both hemispheres 30.5
2620 Female, age 94, left hemisphere 28.9
Parahippocampal cortex
nTPM: 30.2
1933 Female, age 85, both hemispheres 30.8
2018 Male, age 76, both hemispheres 30.8
1850 Male, age 80, both hemispheres 30.6
1990 Female, age 91, right hemisphere 30.5
2250 Female, age 67, right hemisphere 30.3
2622 Female, age 67, right hemisphere 30.0
2693 Female, age 94, both hemispheres 30.0
2532 Female, age 72, left hemisphere 29.9
2692 Male, age 74, both hemispheres 29.8
2245 Female, age 91, both hemispheres 29.5
Perirhinal gyrus
nTPM: 30.3
1794 Male, age 80, right hemisphere 30.8
1841 Female, age 85, right hemisphere 30.8
1847 Female, age 91, left hemisphere 30.6
2521 Female, age 94, right hemisphere 29.8
2848 Male, age 76, right hemisphere 29.6
Subiculum
nTPM: 30.4
1901 Male, age 80, both hemispheres 31.1
1977 Female, age 85, both hemispheres 31.0
2729 Female, age 91, right hemisphere 30.6
2042 Male, age 76, both hemispheres 30.4
2619 Male, age 74, both hemispheres 29.6
2438 Female, age 94, left hemisphere 29.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.3
Samples: 197

Max nTPM: 151.3
Min nTPM: 27.7
Std nTPM: 20.7
Median nTPM: 55.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 151.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 133.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 128.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 115.1
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 114.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 109.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 109.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 100.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 100.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 97.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 96.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.0
FF:10169-103B7 60 years, female 13.6
FF:10153-102I9 76 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 31.0
Min nTPM: 18.5
Sample A Female 31.0
Sample B Female 29.6
Sample C Male 29.3
Sample D Male 18.5
Entorhinal cortex
nTPM: 28.5
Samples: 4

Max nTPM: 41.4
Min nTPM: 20.5
Sample A Female 20.6
Sample B Female 41.4
Sample C Male 31.4
Sample D Male 20.5
Subiculum
nTPM: 24.2
Samples: 4

Max nTPM: 28.3
Min nTPM: 21.5
Sample A Female 25.4
Sample B Female 28.3
Sample C Male 21.5
Sample D Male 21.5
Ventral hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 31.3
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 23.1
Sample C Male 31.3
Sample D Male 24.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 65.7
Samples: 4

Max nTPM: 73.0
Min nTPM: 61.6
Sample A Male 61.6
Sample B Male 73.0
Sample C Female 64.3
Sample D Female 63.7
Hippocampal formation
nTPM: 63.8
Samples: 4

Max nTPM: 72.5
Min nTPM: 54.6
Sample A Male 72.5
Sample B Male 68.7
Sample C Female 59.3
Sample D Female 54.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.5
69080040 Antisense, RP_050324_01_F03, Mouse strain C57BL/6J (56 days, male) 5.5

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