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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:13.9 nTPM
HPA:13.9 nTPM
GTEx:49.3 nTPM
FANTOM5:27.5 Scaled Tags Per Million
Pig:42.1 nTPM
Mouse:9.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045268
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
1898 Male, age 80, left hemisphere 15.5
2529 Female, age 94, left hemisphere 14.0
1911 Female, age 85, right hemisphere 12.9
2148 Female, age 91, left hemisphere 12.7
2621 Female, age 67, right hemisphere 12.3
1855 Male, age 76, left hemisphere 12.0
Dentate gyrus
nTPM: 13.0
2530 Female, age 94, left hemisphere 18.5
2528 Male, age 74, both hemispheres 13.6
2010 Male, age 76, both hemispheres 13.1
2246 Female, age 85, both hemispheres 12.6
1927 Female, age 91, both hemispheres 10.2
2531 Female, age 67, both hemispheres 10.0
Entorhinal gyrus
nTPM: 13.9
2117 Female, age 91, right hemisphere 16.2
1787 Male, age 76, left hemisphere 15.0
2764 Male, age 80, right hemisphere 14.8
2613 Female, age 94, left hemisphere 14.7
1938 Female, age 85, left hemisphere 11.9
2686 Male, age 75, right hemisphere 10.6
Hippocampus, CA1
nTPM: 12.7
2527 Male, age 74, both hemispheres 13.6
2749 Male, age 80, left hemisphere 13.3
1873 Female, age 85, both hemispheres 13.1
2082 Female, age 91, right hemisphere 13.1
2045 Male, age 76, both hemispheres 10.4
Hippocampus, CA2
nTPM: 13.2
1963 Male, age 80, left hemisphere 14.7
2249 Male, age 74, both hemispheres 14.1
2437 Female, age 94, left hemisphere 13.7
1892 Male, age 76, both hemispheres 13.4
2113 Female, age 91, right hemisphere 11.9
1940 Female, age 85, left hemisphere 11.3
Hippocampus, CA3
nTPM: 11.8
2861 Female, age 67, both hemispheres 13.9
2137 Male, age 80, left hemisphere 12.1
2436 Male, age 74, both hemispheres 11.7
1891 Female, age 85, both hemispheres 11.6
1867 Male, age 76, both hemispheres 11.3
2620 Female, age 94, left hemisphere 10.4
Parahippocampal cortex
nTPM: 11.1
2245 Female, age 91, both hemispheres 13.2
2532 Female, age 72, left hemisphere 12.7
2018 Male, age 76, both hemispheres 12.3
2250 Female, age 67, right hemisphere 11.8
1933 Female, age 85, both hemispheres 11.4
2622 Female, age 67, right hemisphere 11.1
1990 Female, age 91, right hemisphere 10.9
2692 Male, age 74, both hemispheres 9.8
1850 Male, age 80, both hemispheres 9.2
2693 Female, age 94, both hemispheres 8.5
Perirhinal gyrus
nTPM: 9.9
1847 Female, age 91, left hemisphere 10.7
1841 Female, age 85, right hemisphere 10.2
1794 Male, age 80, right hemisphere 9.9
2521 Female, age 94, right hemisphere 9.6
2848 Male, age 76, right hemisphere 9.0
Subiculum
nTPM: 12.8
1977 Female, age 85, both hemispheres 14.5
2042 Male, age 76, both hemispheres 14.3
2619 Male, age 74, both hemispheres 14.3
2729 Female, age 91, right hemisphere 12.7
1901 Male, age 80, both hemispheres 12.4
2438 Female, age 94, left hemisphere 8.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 49.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.3
Samples: 197

Max nTPM: 98.7
Min nTPM: 12.6
Std nTPM: 14.2
Median nTPM: 48.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 98.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 86.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 84.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 83.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 83.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 80.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 75.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 74.1
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 73.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 71.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.5
FF:10153-102I9 76 years, female 32.1
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.8
Samples: 4

Max nTPM: 53.1
Min nTPM: 28.5
Sample A Female 53.1
Sample B Female 32.7
Sample C Male 40.8
Sample D Male 28.5
Entorhinal cortex
nTPM: 35.7
Samples: 4

Max nTPM: 42.5
Min nTPM: 31.9
Sample A Female 34.6
Sample B Female 33.6
Sample C Male 42.5
Sample D Male 31.9
Subiculum
nTPM: 42.1
Samples: 4

Max nTPM: 61.5
Min nTPM: 33.8
Sample A Female 61.5
Sample B Female 33.8
Sample C Male 36.6
Sample D Male 36.5
Ventral hippocampus
nTPM: 38.8
Samples: 4

Max nTPM: 45.9
Min nTPM: 25.9
Sample A Female 42.1
Sample B Female 25.9
Sample C Male 45.9
Sample D Male 41.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.2
Sample A Male 9.9
Sample B Male 8.2
Sample C Female 9.6
Sample D Female 8.2
Hippocampal formation
nTPM: 8.0
Samples: 4

Max nTPM: 9.8
Min nTPM: 6.5
Sample A Male 7.0
Sample B Male 6.5
Sample C Female 8.5
Sample D Female 9.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
77923129 Antisense, RP_070219_01_C10, Mouse strain C57BL/6J (56 days, male) 0.9

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