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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:32.9 nTPM
HPA:32.9 nTPM
GTEx:47.6 nTPM
FANTOM5:46.1 Scaled Tags Per Million
Pig:40.8 nTPM
Mouse:45.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049296
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.7
1898 Male, age 80, left hemisphere 31.7
2621 Female, age 67, right hemisphere 29.9
2148 Female, age 91, left hemisphere 27.8
1855 Male, age 76, left hemisphere 27.0
2529 Female, age 94, left hemisphere 26.6
1911 Female, age 85, right hemisphere 23.1
Dentate gyrus
nTPM: 29.6
2530 Female, age 94, left hemisphere 35.6
2010 Male, age 76, both hemispheres 31.8
1927 Female, age 91, both hemispheres 28.9
2531 Female, age 67, both hemispheres 28.6
2246 Female, age 85, both hemispheres 27.0
2528 Male, age 74, both hemispheres 25.6
Entorhinal gyrus
nTPM: 29.6
2613 Female, age 94, left hemisphere 33.6
1938 Female, age 85, left hemisphere 32.1
1787 Male, age 76, left hemisphere 30.6
2764 Male, age 80, right hemisphere 29.9
2686 Male, age 75, right hemisphere 26.2
2117 Female, age 91, right hemisphere 25.4
Hippocampus, CA1
nTPM: 28.9
2749 Male, age 80, left hemisphere 33.1
2045 Male, age 76, both hemispheres 31.6
1873 Female, age 85, both hemispheres 28.6
2527 Male, age 74, both hemispheres 26.5
2082 Female, age 91, right hemisphere 25.0
Hippocampus, CA2
nTPM: 28.5
1963 Male, age 80, left hemisphere 32.9
1892 Male, age 76, both hemispheres 32.2
1940 Female, age 85, left hemisphere 27.8
2437 Female, age 94, left hemisphere 27.8
2113 Female, age 91, right hemisphere 25.3
2249 Male, age 74, both hemispheres 24.7
Hippocampus, CA3
nTPM: 28.0
2861 Female, age 67, both hemispheres 32.0
1867 Male, age 76, both hemispheres 29.5
2620 Female, age 94, left hemisphere 27.9
2137 Male, age 80, left hemisphere 27.8
2436 Male, age 74, both hemispheres 26.3
1891 Female, age 85, both hemispheres 24.6
Parahippocampal cortex
nTPM: 28.8
2245 Female, age 91, both hemispheres 30.7
1850 Male, age 80, both hemispheres 30.0
1933 Female, age 85, both hemispheres 29.8
2250 Female, age 67, right hemisphere 29.5
2532 Female, age 72, left hemisphere 29.5
2622 Female, age 67, right hemisphere 28.3
2692 Male, age 74, both hemispheres 28.3
1990 Female, age 91, right hemisphere 27.6
2018 Male, age 76, both hemispheres 27.5
2693 Female, age 94, both hemispheres 26.6
Perirhinal gyrus
nTPM: 32.9
1847 Female, age 91, left hemisphere 35.4
1794 Male, age 80, right hemisphere 34.4
1841 Female, age 85, right hemisphere 34.4
2848 Male, age 76, right hemisphere 30.8
2521 Female, age 94, right hemisphere 29.6
Subiculum
nTPM: 27.0
1977 Female, age 85, both hemispheres 29.9
2438 Female, age 94, left hemisphere 29.8
2619 Male, age 74, both hemispheres 27.0
1901 Male, age 80, both hemispheres 25.8
2729 Female, age 91, right hemisphere 25.2
2042 Male, age 76, both hemispheres 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.6
Samples: 197

Max nTPM: 86.4
Min nTPM: 23.5
Std nTPM: 13.7
Median nTPM: 45.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 86.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 81.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 81.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 80.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 78.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 76.3
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 74.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 74.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 74.6
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 73.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.1
FF:10153-102I9 76 years, female 49.4
FF:10169-103B7 60 years, female 42.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 46.9
Min nTPM: 29.3
Sample A Female 46.9
Sample B Female 43.7
Sample C Male 36.9
Sample D Male 29.3
Entorhinal cortex
nTPM: 39.6
Samples: 4

Max nTPM: 46.8
Min nTPM: 34.3
Sample A Female 46.8
Sample B Female 34.3
Sample C Male 40.4
Sample D Male 36.7
Subiculum
nTPM: 39.0
Samples: 4

Max nTPM: 48.9
Min nTPM: 33.2
Sample A Female 48.9
Sample B Female 33.2
Sample C Male 38.8
Sample D Male 35.2
Ventral hippocampus
nTPM: 40.8
Samples: 4

Max nTPM: 53.7
Min nTPM: 25.7
Sample A Female 40.8
Sample B Female 25.7
Sample C Male 53.7
Sample D Male 42.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.3
Samples: 4

Max nTPM: 55.7
Min nTPM: 39.3
Sample A Male 40.3
Sample B Male 39.3
Sample C Female 45.9
Sample D Female 55.7
Hippocampal formation
nTPM: 42.8
Samples: 4

Max nTPM: 49.4
Min nTPM: 35.9
Sample A Male 35.9
Sample B Male 40.8
Sample C Female 49.4
Sample D Female 45.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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