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CNKSR2
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:20.3 nTPM
HPA:20.3 nTPM
GTEx:20.3 nTPM
FANTOM5:167.3 Scaled Tags Per Million
Pig:64.5 nTPM
Mouse:127.8 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.3
Sample id Sample description nTPM
Hippocampus
nTPM: 10.9
1898 Male, age 80, left hemisphere 15.0
1855 Male, age 76, left hemisphere 14.6
2148 Female, age 91, left hemisphere 14.2
1911 Female, age 85, right hemisphere 13.5
2621 Female, age 67, right hemisphere 6.8
2529 Female, age 94, left hemisphere 1.2
Dentate gyrus
nTPM: 12.4
1927 Female, age 91, both hemispheres 26.4
2531 Female, age 67, both hemispheres 18.8
2246 Female, age 85, both hemispheres 13.3
2010 Male, age 76, both hemispheres 8.3
2528 Male, age 74, both hemispheres 6.3
2530 Female, age 94, left hemisphere 1.2
Entorhinal gyrus
nTPM: 5.4
1938 Female, age 85, left hemisphere 11.7
2764 Male, age 80, right hemisphere 7.8
1787 Male, age 76, left hemisphere 6.9
2613 Female, age 94, left hemisphere 4.5
2686 Male, age 75, right hemisphere 1.7
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 20.3
2749 Male, age 80, left hemisphere 42.2
2045 Male, age 76, both hemispheres 20.5
1873 Female, age 85, both hemispheres 18.9
2082 Female, age 91, right hemisphere 10.8
2527 Male, age 74, both hemispheres 9.0
Hippocampus, CA2
nTPM: 9.4
1892 Male, age 76, both hemispheres 14.7
1940 Female, age 85, left hemisphere 12.7
1963 Male, age 80, left hemisphere 12.2
2113 Female, age 91, right hemisphere 7.7
2249 Male, age 74, both hemispheres 6.4
2437 Female, age 94, left hemisphere 2.7
Hippocampus, CA3
nTPM: 19.3
2137 Male, age 80, left hemisphere 49.7
2620 Female, age 94, left hemisphere 29.2
1867 Male, age 76, both hemispheres 12.1
2861 Female, age 67, both hemispheres 10.6
1891 Female, age 85, both hemispheres 9.6
2436 Male, age 74, both hemispheres 4.7
Parahippocampal cortex
nTPM: 8.0
2245 Female, age 91, both hemispheres 14.5
1850 Male, age 80, both hemispheres 14.3
1933 Female, age 85, both hemispheres 12.1
2693 Female, age 94, both hemispheres 9.9
2250 Female, age 67, right hemisphere 8.6
1990 Female, age 91, right hemisphere 5.9
2532 Female, age 72, left hemisphere 5.5
2622 Female, age 67, right hemisphere 4.5
2018 Male, age 76, both hemispheres 4.3
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 16.2
1847 Female, age 91, left hemisphere 19.0
2521 Female, age 94, right hemisphere 18.6
1841 Female, age 85, right hemisphere 17.9
1794 Male, age 80, right hemisphere 16.5
2848 Male, age 76, right hemisphere 8.9
Subiculum
nTPM: 6.2
1901 Male, age 80, both hemispheres 16.3
1977 Female, age 85, both hemispheres 8.2
2729 Female, age 91, right hemisphere 7.0
2042 Male, age 76, both hemispheres 5.4
2438 Female, age 94, left hemisphere 0.6
2619 Male, age 74, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 72.4
Min nTPM: 0.8
Std nTPM: 14.8
Median nTPM: 18.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 72.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 66.3
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 61.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 59.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 57.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 56.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 52.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 49.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 167.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 167.3
FF:10169-103B7 60 years, female 235.4
FF:10153-102I9 76 years, female 99.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 64.5
Samples: 4

Max nTPM: 73.4
Min nTPM: 42.3
Sample A Female 73.4
Sample B Female 73.1
Sample C Male 42.3
Sample D Male 69.0
Entorhinal cortex
nTPM: 48.1
Samples: 4

Max nTPM: 54.3
Min nTPM: 42.8
Sample A Female 54.3
Sample B Female 48.3
Sample C Male 42.8
Sample D Male 46.9
Subiculum
nTPM: 33.7
Samples: 4

Max nTPM: 44.3
Min nTPM: 29.3
Sample A Female 44.3
Sample B Female 29.3
Sample C Male 30.8
Sample D Male 30.2
Ventral hippocampus
nTPM: 48.0
Samples: 4

Max nTPM: 75.6
Min nTPM: 35.7
Sample A Female 42.6
Sample B Female 38.0
Sample C Male 35.7
Sample D Male 75.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 127.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.5
Samples: 4

Max nTPM: 122.1
Min nTPM: 97.0
Sample A Male 113.3
Sample B Male 117.7
Sample C Female 97.0
Sample D Female 122.1
Hippocampal formation
nTPM: 127.8
Samples: 4

Max nTPM: 151.6
Min nTPM: 93.8
Sample A Male 116.0
Sample B Male 149.8
Sample C Female 151.6
Sample D Female 93.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
74431564 Antisense, RP_060207_02_B06, Mouse strain C57BL/6J (56 days, male) 1.3

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