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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:60.2 nTPM
HPA:60.2 nTPM
GTEx:58.4 nTPM
FANTOM5:77.2 Scaled Tags Per Million
Pig:25.9 nTPM
Mouse:45.1 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059297Antibody HPA069003Antibody CAB003434
Glial cells Not detectedLowLow
Neuronal cells Not detectedNot detectedMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.2
Sample id Sample description nTPM
Hippocampus
nTPM: 59.6
2529 Female, age 94, left hemisphere 62.7
1855 Male, age 76, left hemisphere 60.8
1911 Female, age 85, right hemisphere 60.4
2621 Female, age 67, right hemisphere 59.3
2148 Female, age 91, left hemisphere 58.8
1898 Male, age 80, left hemisphere 55.5
Dentate gyrus
nTPM: 60.2
2530 Female, age 94, left hemisphere 65.2
2010 Male, age 76, both hemispheres 64.8
2531 Female, age 67, both hemispheres 58.9
1927 Female, age 91, both hemispheres 58.7
2246 Female, age 85, both hemispheres 57.0
2528 Male, age 74, both hemispheres 56.7
Entorhinal gyrus
nTPM: 54.6
2686 Male, age 75, right hemisphere 62.8
2117 Female, age 91, right hemisphere 60.8
1787 Male, age 76, left hemisphere 52.7
2613 Female, age 94, left hemisphere 51.8
1938 Female, age 85, left hemisphere 50.4
2764 Male, age 80, right hemisphere 49.0
Hippocampus, CA1
nTPM: 57.8
2045 Male, age 76, both hemispheres 68.4
2527 Male, age 74, both hemispheres 59.5
1873 Female, age 85, both hemispheres 56.6
2749 Male, age 80, left hemisphere 53.7
2082 Female, age 91, right hemisphere 50.7
Hippocampus, CA2
nTPM: 57.5
1963 Male, age 80, left hemisphere 60.9
2437 Female, age 94, left hemisphere 60.0
1892 Male, age 76, both hemispheres 58.4
2249 Male, age 74, both hemispheres 57.0
1940 Female, age 85, left hemisphere 54.3
2113 Female, age 91, right hemisphere 54.2
Hippocampus, CA3
nTPM: 60.2
1867 Male, age 76, both hemispheres 67.4
2620 Female, age 94, left hemisphere 64.6
2137 Male, age 80, left hemisphere 59.5
1891 Female, age 85, both hemispheres 58.7
2861 Female, age 67, both hemispheres 58.0
2436 Male, age 74, both hemispheres 53.1
Parahippocampal cortex
nTPM: 56.1
2018 Male, age 76, both hemispheres 63.3
2692 Male, age 74, both hemispheres 60.3
2532 Female, age 72, left hemisphere 58.6
1933 Female, age 85, both hemispheres 55.4
1990 Female, age 91, right hemisphere 55.0
2245 Female, age 91, both hemispheres 55.0
2693 Female, age 94, both hemispheres 54.5
1850 Male, age 80, both hemispheres 54.2
2622 Female, age 67, right hemisphere 52.9
2250 Female, age 67, right hemisphere 51.3
Perirhinal gyrus
nTPM: 50.7
2848 Male, age 76, right hemisphere 53.8
1841 Female, age 85, right hemisphere 52.6
2521 Female, age 94, right hemisphere 51.6
1794 Male, age 80, right hemisphere 48.5
1847 Female, age 91, left hemisphere 47.0
Subiculum
nTPM: 60.0
2042 Male, age 76, both hemispheres 69.9
2438 Female, age 94, left hemisphere 60.7
1901 Male, age 80, both hemispheres 60.2
2729 Female, age 91, right hemisphere 58.0
2619 Male, age 74, both hemispheres 56.7
1977 Female, age 85, both hemispheres 54.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.4
Samples: 197

Max nTPM: 127.5
Min nTPM: 23.7
Std nTPM: 22.6
Median nTPM: 54.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 127.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 121.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 119.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 119.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 118.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 113.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 111.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 109.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 108.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 107.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 106.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 77.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 77.2
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 75.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 23.1
Samples: 4

Max nTPM: 29.8
Min nTPM: 19.0
Sample A Female 29.8
Sample B Female 19.0
Sample C Male 22.2
Sample D Male 21.4
Entorhinal cortex
nTPM: 25.7
Samples: 4

Max nTPM: 32.0
Min nTPM: 22.3
Sample A Female 32.0
Sample B Female 24.8
Sample C Male 23.5
Sample D Male 22.3
Subiculum
nTPM: 25.9
Samples: 4

Max nTPM: 32.8
Min nTPM: 19.9
Sample A Female 32.8
Sample B Female 19.9
Sample C Male 22.8
Sample D Male 28.1
Ventral hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 24.6
Min nTPM: 18.6
Sample A Female 24.6
Sample B Female 18.6
Sample C Male 24.4
Sample D Male 23.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.1
Samples: 4

Max nTPM: 47.7
Min nTPM: 42.8
Sample A Male 46.3
Sample B Male 42.8
Sample C Female 43.7
Sample D Female 47.7
Hippocampal formation
nTPM: 40.3
Samples: 4

Max nTPM: 42.4
Min nTPM: 37.6
Sample A Male 39.5
Sample B Male 37.6
Sample C Female 41.5
Sample D Female 42.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
76115730 Antisense, RP_060620_02_B09, Mouse strain C57BL/6J (56 days, male) 2.2
69735616 Antisense, RP_050503_03_B07, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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