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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:15.6 nTPM
HPA:15.6 nTPM
GTEx:13.3 nTPM
FANTOM5:35.7 Scaled Tags Per Million
Pig:3.4 nTPM
Mouse:24.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.6
Sample id Sample description nTPM
Hippocampus
nTPM: 13.9
1898 Male, age 80, left hemisphere 16.1
1855 Male, age 76, left hemisphere 14.7
2148 Female, age 91, left hemisphere 14.2
2529 Female, age 94, left hemisphere 13.1
1911 Female, age 85, right hemisphere 12.7
2621 Female, age 67, right hemisphere 12.3
Dentate gyrus
nTPM: 13.6
1927 Female, age 91, both hemispheres 14.3
2528 Male, age 74, both hemispheres 14.2
2010 Male, age 76, both hemispheres 14.1
2530 Female, age 94, left hemisphere 14.0
2531 Female, age 67, both hemispheres 12.8
2246 Female, age 85, both hemispheres 12.4
Entorhinal gyrus
nTPM: 13.8
2764 Male, age 80, right hemisphere 14.8
1938 Female, age 85, left hemisphere 14.2
2613 Female, age 94, left hemisphere 13.9
2117 Female, age 91, right hemisphere 13.8
1787 Male, age 76, left hemisphere 13.1
2686 Male, age 75, right hemisphere 12.7
Hippocampus, CA1
nTPM: 14.9
2749 Male, age 80, left hemisphere 17.7
1873 Female, age 85, both hemispheres 15.4
2527 Male, age 74, both hemispheres 14.7
2082 Female, age 91, right hemisphere 14.2
2045 Male, age 76, both hemispheres 12.6
Hippocampus, CA2
nTPM: 14.7
1963 Male, age 80, left hemisphere 17.2
1892 Male, age 76, both hemispheres 16.7
2249 Male, age 74, both hemispheres 15.0
2113 Female, age 91, right hemisphere 13.8
2437 Female, age 94, left hemisphere 13.2
1940 Female, age 85, left hemisphere 12.2
Hippocampus, CA3
nTPM: 14.2
1867 Male, age 76, both hemispheres 15.0
2436 Male, age 74, both hemispheres 14.7
1891 Female, age 85, both hemispheres 14.4
2137 Male, age 80, left hemisphere 14.4
2620 Female, age 94, left hemisphere 13.9
2861 Female, age 67, both hemispheres 12.8
Parahippocampal cortex
nTPM: 13.7
1850 Male, age 80, both hemispheres 15.5
2693 Female, age 94, both hemispheres 14.8
2692 Male, age 74, both hemispheres 14.5
2250 Female, age 67, right hemisphere 14.0
1990 Female, age 91, right hemisphere 13.8
1933 Female, age 85, both hemispheres 13.7
2622 Female, age 67, right hemisphere 13.5
2532 Female, age 72, left hemisphere 12.9
2018 Male, age 76, both hemispheres 12.2
2245 Female, age 91, both hemispheres 12.2
Perirhinal gyrus
nTPM: 15.6
1847 Female, age 91, left hemisphere 16.6
1794 Male, age 80, right hemisphere 16.2
2521 Female, age 94, right hemisphere 15.4
2848 Male, age 76, right hemisphere 15.2
1841 Female, age 85, right hemisphere 14.6
Subiculum
nTPM: 12.9
2729 Female, age 91, right hemisphere 14.4
1977 Female, age 85, both hemispheres 13.4
2619 Male, age 74, both hemispheres 13.4
1901 Male, age 80, both hemispheres 12.6
2042 Male, age 76, both hemispheres 12.1
2438 Female, age 94, left hemisphere 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.3
Samples: 197

Max nTPM: 19.2
Min nTPM: 8.4
Std nTPM: 1.7
Median nTPM: 13.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 19.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 18.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 18.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 17.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 17.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 16.8
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 16.7
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 16.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 16.4
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 16.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 16.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.7
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 30.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 4.6
Min nTPM: 2.6
Sample A Female 2.6
Sample B Female 3.2
Sample C Male 3.1
Sample D Male 4.6
Entorhinal cortex
nTPM: 3.0
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.3
Sample A Female 2.3
Sample B Female 3.6
Sample C Male 2.4
Sample D Male 3.5
Subiculum
nTPM: 2.7
Samples: 4

Max nTPM: 3.2
Min nTPM: 2.0
Sample A Female 2.8
Sample B Female 2.6
Sample C Male 3.2
Sample D Male 2.0
Ventral hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.2
Sample A Female 2.2
Sample B Female 4.0
Sample C Male 3.1
Sample D Male 3.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.0
Samples: 4

Max nTPM: 25.3
Min nTPM: 22.4
Sample A Male 25.3
Sample B Male 23.4
Sample C Female 22.4
Sample D Female 24.9
Hippocampal formation
nTPM: 23.7
Samples: 4

Max nTPM: 25.3
Min nTPM: 22.7
Sample A Male 22.7
Sample B Male 22.8
Sample C Female 25.3
Sample D Female 23.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
392918 Antisense, RP_040804_01_G07, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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