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NBAS
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.4 nTPM
HPA:37.4 nTPM
GTEx:26.5 nTPM
FANTOM5:59.8 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:7.6 nTPM
Allen mouse:0.2 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 37.4
Sample id Sample description nTPM
Amygdala
nTPM: 33.5
2517 Female, age 94, left hemisphere 34.9
2514 Male, age 75, right hemisphere 34.7
1987 Female, age 91, left hemisphere 33.7
2695 Female, age 67, right hemisphere 33.1
2814 Male, age 76, right hemisphere 31.3
Basal amygdala
nTPM: 34.7
2110 Male, age 80, left hemisphere 38.5
2685 Female, age 94, left hemisphere 35.2
2827 Female, age 67, right hemisphere 34.3
2243 Female, age 91, right hemisphere 33.7
2609 Male, age 75, right hemisphere 33.6
1955 Male, age 76, both hemispheres 33.1
Central amygdala
nTPM: 33.2
2701 Female, age 91, right hemisphere 34.5
2826 Female, age 94, left hemisphere 33.9
2239 Male, age 80, left hemisphere 33.6
2515 Male, age 75, right hemisphere 33.2
1905 Male, age 76, both hemispheres 30.8
Corticomedial amygdala
nTPM: 35.4
2829 Male, age 80, left hemisphere 39.3
2428 Male, age 75, right hemisphere 35.6
2429 Female, age 94, left hemisphere 35.2
2242 Female, age 91, right hemisphere 34.3
2240 Male, age 76, both hemispheres 34.2
2535 Female, age 67, right hemisphere 34.0
Lateral amygdala
nTPM: 33.7
2516 Male, age 75, right hemisphere 35.5
2534 Female, age 94, left hemisphere 34.1
2830 Female, age 67, right hemisphere 33.7
2255 Female, age 91, right hemisphere 33.5
1883 Male, age 76, both hemispheres 32.8
2256 Male, age 80, left hemisphere 32.5
Stria terminalis, bed nucleus
nTPM: 37.4
2486 Female, age 94, both hemispheres 39.2
1974 Female, age 91, both hemispheres 38.1
2201 Male, age 74, unknown 34.9

AMYGDALA - GTEx RNA-seqi
Average nTPM 26.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 26.5
Samples: 152

Max nTPM: 48.7
Min nTPM: 13.9
Std nTPM: 6.1
Median nTPM: 25.9
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 48.7
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 45.2
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 41.9
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 41.9
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 40.2
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 39.8
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 39.3
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 38.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 37.7
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 37.7
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 37.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 59.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 59.8
FF:10151-102I7 76 years, female 59.8

AMYGDALA - Pig RNA-seqi
Average nTPM 10.9
Pig sample Sample description nTPM
Amygdala
nTPM: 10.9
Samples: 4

Max nTPM: 11.8
Min nTPM: 9.6
Sample A Female 11.8
Sample B Female 9.6
Sample C Male 11.3
Sample D Male 10.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 7.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 7.6
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.8
Sample A Male 8.6
Sample B Male 6.8
Sample C Female 7.7
Sample D Female 7.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.2
70611144 Antisense, RP_050630_02_B04, Mouse strain C57BL/6J (56 days, male) 0.3
68862114 Antisense, RP_050301_01_E10, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.