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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:744.6 nTPM
HPA:744.6 nTPM
GTEx:574.2 nTPM
FANTOM5:1990.8 Scaled Tags Per Million
Pig:957.9 nTPM
Mouse:1750.3 nTPM
Allen mouse:21.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB026225
Glial cells High
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 744.6
Sample id Sample description nTPM
Hippocampus
nTPM: 678.0
2529 Female, age 94, left hemisphere 800.9
2621 Female, age 67, right hemisphere 679.8
2148 Female, age 91, left hemisphere 669.8
1898 Male, age 80, left hemisphere 663.0
1911 Female, age 85, right hemisphere 659.5
1855 Male, age 76, left hemisphere 595.0
Dentate gyrus
nTPM: 579.2
2246 Female, age 85, both hemispheres 632.0
2528 Male, age 74, both hemispheres 626.1
1927 Female, age 91, both hemispheres 599.3
2010 Male, age 76, both hemispheres 554.4
2531 Female, age 67, both hemispheres 542.3
2530 Female, age 94, left hemisphere 520.9
Entorhinal gyrus
nTPM: 653.9
2117 Female, age 91, right hemisphere 753.3
1938 Female, age 85, left hemisphere 696.9
2764 Male, age 80, right hemisphere 665.2
2686 Male, age 75, right hemisphere 637.5
1787 Male, age 76, left hemisphere 603.4
2613 Female, age 94, left hemisphere 567.1
Hippocampus, CA1
nTPM: 629.1
2527 Male, age 74, both hemispheres 727.7
1873 Female, age 85, both hemispheres 628.7
2749 Male, age 80, left hemisphere 623.9
2082 Female, age 91, right hemisphere 611.0
2045 Male, age 76, both hemispheres 554.2
Hippocampus, CA2
nTPM: 621.7
2113 Female, age 91, right hemisphere 688.8
2249 Male, age 74, both hemispheres 644.5
2437 Female, age 94, left hemisphere 617.4
1892 Male, age 76, both hemispheres 614.0
1940 Female, age 85, left hemisphere 601.0
1963 Male, age 80, left hemisphere 564.3
Hippocampus, CA3
nTPM: 624.2
2436 Male, age 74, both hemispheres 675.3
1891 Female, age 85, both hemispheres 675.1
1867 Male, age 76, both hemispheres 618.5
2861 Female, age 67, both hemispheres 598.6
2620 Female, age 94, left hemisphere 591.2
2137 Male, age 80, left hemisphere 586.8
Parahippocampal cortex
nTPM: 716.1
2622 Female, age 67, right hemisphere 795.2
1850 Male, age 80, both hemispheres 764.6
2532 Female, age 72, left hemisphere 743.5
2250 Female, age 67, right hemisphere 726.9
2245 Female, age 91, both hemispheres 723.9
2692 Male, age 74, both hemispheres 703.6
2693 Female, age 94, both hemispheres 699.8
1933 Female, age 85, both hemispheres 697.4
1990 Female, age 91, right hemisphere 687.4
2018 Male, age 76, both hemispheres 618.5
Perirhinal gyrus
nTPM: 744.6
1794 Male, age 80, right hemisphere 814.5
1841 Female, age 85, right hemisphere 803.9
2521 Female, age 94, right hemisphere 776.3
1847 Female, age 91, left hemisphere 689.9
2848 Male, age 76, right hemisphere 638.2
Subiculum
nTPM: 679.3
2438 Female, age 94, left hemisphere 772.7
2619 Male, age 74, both hemispheres 745.7
2729 Female, age 91, right hemisphere 679.2
1901 Male, age 80, both hemispheres 662.1
1977 Female, age 85, both hemispheres 644.5
2042 Male, age 76, both hemispheres 571.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 574.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 574.2
Samples: 197

Max nTPM: 1820.5
Min nTPM: 132.3
Std nTPM: 302.6
Median nTPM: 521.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 1820.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 1530.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 1516.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1508.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1401.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 1321.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1280.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 1262.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1226.0
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 1218.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 1186.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1990.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1990.8
FF:10153-102I9 76 years, female 2302.2
FF:10169-103B7 60 years, female 1679.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 957.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 714.8
Samples: 4

Max nTPM: 874.7
Min nTPM: 612.6
Sample A Female 874.7
Sample B Female 612.6
Sample C Male 745.7
Sample D Male 626.1
Entorhinal cortex
nTPM: 834.4
Samples: 4

Max nTPM: 947.0
Min nTPM: 687.9
Sample A Female 947.0
Sample B Female 884.6
Sample C Male 818.1
Sample D Male 687.9
Subiculum
nTPM: 958.0
Samples: 4

Max nTPM: 1434.5
Min nTPM: 769.5
Sample A Female 1434.5
Sample B Female 851.3
Sample C Male 769.5
Sample D Male 776.5
Ventral hippocampus
nTPM: 752.1
Samples: 4

Max nTPM: 941.5
Min nTPM: 580.8
Sample A Female 941.5
Sample B Female 766.2
Sample C Male 719.8
Sample D Male 580.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1750.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1750.3
Samples: 4

Max nTPM: 1874.7
Min nTPM: 1621.5
Sample A Male 1874.7
Sample B Male 1621.5
Sample C Female 1813.9
Sample D Female 1691.1
Hippocampal formation
nTPM: 1342.9
Samples: 4

Max nTPM: 1543.6
Min nTPM: 1124.0
Sample A Male 1543.6
Sample B Male 1271.0
Sample C Female 1124.0
Sample D Female 1432.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.1
70429447 Antisense, RP_050614_01_F10, Mouse strain C57BL/6J (56 days, male) 22.7
74750016 Antisense, RP_060220_05_E06, Mouse strain C57BL/6J (56 days, male) 19.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.