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PRDM8
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.7 nTPM
HPA:13.7 nTPM
GTEx:15.0 nTPM
FANTOM5:163.0 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:28.7 nTPM

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.7
Sample id Sample description nTPM
Hippocampus
nTPM: 9.3
2621 Female, age 67, right hemisphere 19.2
1855 Male, age 76, left hemisphere 13.9
2148 Female, age 91, left hemisphere 13.4
1898 Male, age 80, left hemisphere 9.5
1911 Female, age 85, right hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
Dentate gyrus
nTPM: 13.7
2530 Female, age 94, left hemisphere 22.0
1927 Female, age 91, both hemispheres 20.0
2010 Male, age 76, both hemispheres 16.0
2531 Female, age 67, both hemispheres 10.1
2246 Female, age 85, both hemispheres 7.6
2528 Male, age 74, both hemispheres 6.3
Entorhinal gyrus
nTPM: 1.8
1787 Male, age 76, left hemisphere 7.0
1938 Female, age 85, left hemisphere 4.1
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
2764 Male, age 80, right hemisphere 0.0
Hippocampus, CA1
nTPM: 9.9
2749 Male, age 80, left hemisphere 21.0
1873 Female, age 85, both hemispheres 18.5
2527 Male, age 74, both hemispheres 6.9
2045 Male, age 76, both hemispheres 3.2
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 10.1
1892 Male, age 76, both hemispheres 24.4
1963 Male, age 80, left hemisphere 24.2
1940 Female, age 85, left hemisphere 8.3
2437 Female, age 94, left hemisphere 3.9
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 5.9
2861 Female, age 67, both hemispheres 21.2
2620 Female, age 94, left hemisphere 14.7
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 1.5
2250 Female, age 67, right hemisphere 6.8
2622 Female, age 67, right hemisphere 3.8
1990 Female, age 91, right hemisphere 2.3
2532 Female, age 72, left hemisphere 1.4
1933 Female, age 85, both hemispheres 1.0
1850 Male, age 80, both hemispheres 0.0
2018 Male, age 76, both hemispheres 0.0
2245 Female, age 91, both hemispheres 0.0
2692 Male, age 74, both hemispheres 0.0
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 2.4
2521 Female, age 94, right hemisphere 4.3
1841 Female, age 85, right hemisphere 2.9
1794 Male, age 80, right hemisphere 2.6
1847 Female, age 91, left hemisphere 2.3
2848 Male, age 76, right hemisphere 0.0
Subiculum
nTPM: 0.1
2619 Male, age 74, both hemispheres 0.7
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.0
Samples: 197

Max nTPM: 83.5
Min nTPM: 2.4
Std nTPM: 13.5
Median nTPM: 10.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 83.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 67.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 66.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 59.9
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 53.7
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 52.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 50.1
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 49.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 48.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 45.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 44.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 163.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 163.0
FF:10169-103B7 60 years, female 221.8
FF:10153-102I9 76 years, female 104.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 24.1
Min nTPM: 5.0
Sample A Female 20.0
Sample B Female 20.2
Sample C Male 5.0
Sample D Male 24.1
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 19.2
Min nTPM: 13.0
Sample A Female 19.2
Sample B Female 14.4
Sample C Male 18.4
Sample D Male 13.0
Subiculum
nTPM: 16.1
Samples: 4

Max nTPM: 21.7
Min nTPM: 11.8
Sample A Female 21.7
Sample B Female 16.3
Sample C Male 11.8
Sample D Male 14.6
Ventral hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 20.8
Min nTPM: 9.7
Sample A Female 18.9
Sample B Female 13.2
Sample C Male 20.8
Sample D Male 9.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 14.6
Min nTPM: 10.8
Sample A Male 12.4
Sample B Male 10.8
Sample C Female 14.2
Sample D Female 14.6
Hippocampal formation
nTPM: 28.7
Samples: 4

Max nTPM: 38.5
Min nTPM: 20.8
Sample A Male 20.8
Sample B Male 33.5
Sample C Female 38.5
Sample D Female 22.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.