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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:122.5 nTPM
HPA:122.5 nTPM
GTEx:111.4 nTPM
FANTOM5:364.9 Scaled Tags Per Million
Pig:103.7 nTPM
Mouse:46.6 nTPM
Allen mouse:26.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041057Antibody HPA058707Antibody CAB011532
Glial cells MediumHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 122.5
Sample id Sample description nTPM
Hippocampus
nTPM: 119.3
1855 Male, age 76, left hemisphere 122.4
1898 Male, age 80, left hemisphere 122.3
2529 Female, age 94, left hemisphere 122.0
1911 Female, age 85, right hemisphere 119.5
2148 Female, age 91, left hemisphere 115.6
2621 Female, age 67, right hemisphere 113.8
Dentate gyrus
nTPM: 117.5
2010 Male, age 76, both hemispheres 119.5
2246 Female, age 85, both hemispheres 119.2
2528 Male, age 74, both hemispheres 119.0
2530 Female, age 94, left hemisphere 118.5
1927 Female, age 91, both hemispheres 115.6
2531 Female, age 67, both hemispheres 113.2
Entorhinal gyrus
nTPM: 117.2
1938 Female, age 85, left hemisphere 125.0
2686 Male, age 75, right hemisphere 120.1
2117 Female, age 91, right hemisphere 117.4
2764 Male, age 80, right hemisphere 115.7
1787 Male, age 76, left hemisphere 112.5
2613 Female, age 94, left hemisphere 112.5
Hippocampus, CA1
nTPM: 122.5
2749 Male, age 80, left hemisphere 130.6
1873 Female, age 85, both hemispheres 126.1
2045 Male, age 76, both hemispheres 122.6
2527 Male, age 74, both hemispheres 119.4
2082 Female, age 91, right hemisphere 113.8
Hippocampus, CA2
nTPM: 118.1
1892 Male, age 76, both hemispheres 125.0
2249 Male, age 74, both hemispheres 121.7
1963 Male, age 80, left hemisphere 121.2
2113 Female, age 91, right hemisphere 116.4
1940 Female, age 85, left hemisphere 113.8
2437 Female, age 94, left hemisphere 110.5
Hippocampus, CA3
nTPM: 120.7
1867 Male, age 76, both hemispheres 134.4
2137 Male, age 80, left hemisphere 131.4
1891 Female, age 85, both hemispheres 118.5
2436 Male, age 74, both hemispheres 115.4
2620 Female, age 94, left hemisphere 113.2
2861 Female, age 67, both hemispheres 111.1
Parahippocampal cortex
nTPM: 117.2
1933 Female, age 85, both hemispheres 119.8
1850 Male, age 80, both hemispheres 119.5
2532 Female, age 72, left hemisphere 119.3
2250 Female, age 67, right hemisphere 118.3
2692 Male, age 74, both hemispheres 117.3
2018 Male, age 76, both hemispheres 116.5
2245 Female, age 91, both hemispheres 116.2
2693 Female, age 94, both hemispheres 115.9
1990 Female, age 91, right hemisphere 115.2
2622 Female, age 67, right hemisphere 113.7
Perirhinal gyrus
nTPM: 118.4
1841 Female, age 85, right hemisphere 126.7
2521 Female, age 94, right hemisphere 117.8
1794 Male, age 80, right hemisphere 116.7
1847 Female, age 91, left hemisphere 115.4
2848 Male, age 76, right hemisphere 115.3
Subiculum
nTPM: 119.6
2042 Male, age 76, both hemispheres 127.9
1977 Female, age 85, both hemispheres 124.8
1901 Male, age 80, both hemispheres 120.9
2729 Female, age 91, right hemisphere 116.6
2619 Male, age 74, both hemispheres 116.4
2438 Female, age 94, left hemisphere 110.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 111.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.4
Samples: 197

Max nTPM: 172.8
Min nTPM: 71.5
Std nTPM: 17.3
Median nTPM: 107.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 172.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 163.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 160.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 157.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 157.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 156.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 151.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 148.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 144.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 143.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 142.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 364.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 364.9
FF:10153-102I9 76 years, female 400.3
FF:10169-103B7 60 years, female 329.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 103.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 103.7
Samples: 4

Max nTPM: 112.1
Min nTPM: 94.9
Sample A Female 112.1
Sample B Female 99.6
Sample C Male 108.2
Sample D Male 94.9
Entorhinal cortex
nTPM: 94.6
Samples: 4

Max nTPM: 102.6
Min nTPM: 90.0
Sample A Female 93.8
Sample B Female 102.6
Sample C Male 91.8
Sample D Male 90.0
Subiculum
nTPM: 103.6
Samples: 4

Max nTPM: 121.9
Min nTPM: 94.4
Sample A Female 121.9
Sample B Female 100.7
Sample C Male 97.5
Sample D Male 94.4
Ventral hippocampus
nTPM: 97.9
Samples: 4

Max nTPM: 102.8
Min nTPM: 92.6
Sample A Female 96.8
Sample B Female 92.6
Sample C Male 99.5
Sample D Male 102.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.5
Samples: 4

Max nTPM: 48.4
Min nTPM: 43.8
Sample A Male 44.5
Sample B Male 45.1
Sample C Female 43.8
Sample D Female 48.4
Hippocampal formation
nTPM: 46.7
Samples: 4

Max nTPM: 52.4
Min nTPM: 41.3
Sample A Male 42.8
Sample B Male 52.4
Sample C Female 50.1
Sample D Female 41.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 26.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.3
386235 Antisense, RP_040804_01_C08, Mouse strain C57BL/6J (56 days, male) 26.3

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The Human Protein Atlas

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