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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:15.6 nTPM
HPA:15.6 nTPM
GTEx:13.8 nTPM
FANTOM5:35.6 Scaled Tags Per Million
Pig:8.8 nTPM
Mouse:13.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012024
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.6
Sample id Sample description nTPM
Hippocampus
nTPM: 14.9
1898 Male, age 80, left hemisphere 16.1
1855 Male, age 76, left hemisphere 15.9
2529 Female, age 94, left hemisphere 15.3
1911 Female, age 85, right hemisphere 14.3
2621 Female, age 67, right hemisphere 14.1
2148 Female, age 91, left hemisphere 13.5
Dentate gyrus
nTPM: 14.4
2010 Male, age 76, both hemispheres 15.2
2528 Male, age 74, both hemispheres 15.2
1927 Female, age 91, both hemispheres 14.8
2530 Female, age 94, left hemisphere 14.5
2246 Female, age 85, both hemispheres 13.5
2531 Female, age 67, both hemispheres 13.1
Entorhinal gyrus
nTPM: 13.6
1938 Female, age 85, left hemisphere 15.3
1787 Male, age 76, left hemisphere 14.3
2117 Female, age 91, right hemisphere 14.0
2686 Male, age 75, right hemisphere 13.1
2764 Male, age 80, right hemisphere 13.1
2613 Female, age 94, left hemisphere 12.1
Hippocampus, CA1
nTPM: 15.6
2749 Male, age 80, left hemisphere 17.9
1873 Female, age 85, both hemispheres 15.4
2527 Male, age 74, both hemispheres 15.4
2082 Female, age 91, right hemisphere 15.1
2045 Male, age 76, both hemispheres 14.0
Hippocampus, CA2
nTPM: 14.9
1963 Male, age 80, left hemisphere 16.1
2249 Male, age 74, both hemispheres 15.7
1940 Female, age 85, left hemisphere 15.4
1892 Male, age 76, both hemispheres 15.1
2113 Female, age 91, right hemisphere 14.1
2437 Female, age 94, left hemisphere 13.2
Hippocampus, CA3
nTPM: 14.3
2137 Male, age 80, left hemisphere 15.7
1867 Male, age 76, both hemispheres 14.6
1891 Female, age 85, both hemispheres 14.2
2436 Male, age 74, both hemispheres 14.0
2861 Female, age 67, both hemispheres 13.9
2620 Female, age 94, left hemisphere 13.4
Parahippocampal cortex
nTPM: 14.4
2250 Female, age 67, right hemisphere 16.2
1850 Male, age 80, both hemispheres 15.6
1933 Female, age 85, both hemispheres 14.7
2245 Female, age 91, both hemispheres 14.6
1990 Female, age 91, right hemisphere 14.5
2693 Female, age 94, both hemispheres 14.4
2018 Male, age 76, both hemispheres 14.0
2532 Female, age 72, left hemisphere 13.6
2692 Male, age 74, both hemispheres 13.2
2622 Female, age 67, right hemisphere 13.0
Perirhinal gyrus
nTPM: 15.2
1841 Female, age 85, right hemisphere 15.8
1847 Female, age 91, left hemisphere 15.6
2521 Female, age 94, right hemisphere 15.3
2848 Male, age 76, right hemisphere 15.2
1794 Male, age 80, right hemisphere 14.2
Subiculum
nTPM: 13.7
1901 Male, age 80, both hemispheres 14.5
2729 Female, age 91, right hemisphere 14.4
2042 Male, age 76, both hemispheres 14.0
1977 Female, age 85, both hemispheres 13.9
2619 Male, age 74, both hemispheres 13.4
2438 Female, age 94, left hemisphere 12.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 46.5
Min nTPM: 7.5
Std nTPM: 4.0
Median nTPM: 13.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 46.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 34.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 23.5
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 23.0
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 22.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 22.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 19.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 19.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 19.7
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 19.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.6
FF:10169-103B7 60 years, female 36.6
FF:10153-102I9 76 years, female 34.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.4
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.3
Sample A Female 8.4
Sample B Female 7.8
Sample C Male 9.9
Sample D Male 7.3
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.7
Sample A Female 8.0
Sample B Female 9.3
Sample C Male 8.7
Sample D Male 7.7
Subiculum
nTPM: 8.8
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.0
Sample A Female 10.6
Sample B Female 8.3
Sample C Male 8.0
Sample D Male 8.2
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.6
Sample A Female 7.7
Sample B Female 7.7
Sample C Male 7.6
Sample D Male 8.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 13.6
Min nTPM: 11.8
Sample A Male 13.6
Sample B Male 13.3
Sample C Female 12.7
Sample D Female 11.8
Hippocampal formation
nTPM: 13.6
Samples: 4

Max nTPM: 14.3
Min nTPM: 12.8
Sample A Male 13.9
Sample B Male 14.3
Sample C Female 13.3
Sample D Female 12.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70539130 Antisense, RP_050321_03_D11, Mouse strain C57BL/6J (56 days, male) 0.1

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