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CC2D1B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:13.1 nTPM
HPA:13.1 nTPM
GTEx:15.1 nTPM
FANTOM5:15.4 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:8.7 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027500
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.1
Sample id Sample description nTPM
Hippocampus
nTPM: 12.7
1898 Male, age 80, left hemisphere 13.2
2148 Female, age 91, left hemisphere 12.9
2621 Female, age 67, right hemisphere 12.8
1855 Male, age 76, left hemisphere 12.7
2529 Female, age 94, left hemisphere 12.4
1911 Female, age 85, right hemisphere 12.3
Dentate gyrus
nTPM: 12.9
2530 Female, age 94, left hemisphere 14.3
2010 Male, age 76, both hemispheres 13.5
2528 Male, age 74, both hemispheres 12.9
2531 Female, age 67, both hemispheres 12.5
2246 Female, age 85, both hemispheres 12.3
1927 Female, age 91, both hemispheres 12.2
Entorhinal gyrus
nTPM: 13.1
2117 Female, age 91, right hemisphere 14.9
2764 Male, age 80, right hemisphere 13.2
1787 Male, age 76, left hemisphere 12.7
1938 Female, age 85, left hemisphere 12.7
2686 Male, age 75, right hemisphere 12.6
2613 Female, age 94, left hemisphere 12.4
Hippocampus, CA1
nTPM: 12.5
2082 Female, age 91, right hemisphere 12.6
2527 Male, age 74, both hemispheres 12.6
1873 Female, age 85, both hemispheres 12.5
2045 Male, age 76, both hemispheres 12.5
2749 Male, age 80, left hemisphere 12.1
Hippocampus, CA2
nTPM: 12.9
1940 Female, age 85, left hemisphere 13.6
2249 Male, age 74, both hemispheres 13.4
1963 Male, age 80, left hemisphere 13.3
2113 Female, age 91, right hemisphere 12.7
1892 Male, age 76, both hemispheres 12.4
2437 Female, age 94, left hemisphere 12.0
Hippocampus, CA3
nTPM: 12.5
1891 Female, age 85, both hemispheres 13.3
1867 Male, age 76, both hemispheres 12.8
2620 Female, age 94, left hemisphere 12.5
2861 Female, age 67, both hemispheres 12.2
2436 Male, age 74, both hemispheres 12.1
2137 Male, age 80, left hemisphere 12.0
Parahippocampal cortex
nTPM: 12.6
2532 Female, age 72, left hemisphere 13.5
2692 Male, age 74, both hemispheres 13.5
2018 Male, age 76, both hemispheres 12.9
1990 Female, age 91, right hemisphere 12.7
1933 Female, age 85, both hemispheres 12.5
2622 Female, age 67, right hemisphere 12.5
1850 Male, age 80, both hemispheres 12.3
2250 Female, age 67, right hemisphere 12.2
2693 Female, age 94, both hemispheres 12.1
2245 Female, age 91, both hemispheres 11.9
Perirhinal gyrus
nTPM: 12.1
2848 Male, age 76, right hemisphere 12.5
1794 Male, age 80, right hemisphere 12.3
1841 Female, age 85, right hemisphere 11.9
1847 Female, age 91, left hemisphere 11.9
2521 Female, age 94, right hemisphere 11.7
Subiculum
nTPM: 13.1
2042 Male, age 76, both hemispheres 13.5
1901 Male, age 80, both hemispheres 13.4
2619 Male, age 74, both hemispheres 13.3
1977 Female, age 85, both hemispheres 13.0
2438 Female, age 94, left hemisphere 12.8
2729 Female, age 91, right hemisphere 12.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.1
Samples: 197

Max nTPM: 43.4
Min nTPM: 7.3
Std nTPM: 4.8
Median nTPM: 14.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 43.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 32.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 31.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 27.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 26.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 26.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 25.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 24.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 24.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 23.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 15.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.4
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 14.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 13.2
Min nTPM: 8.1
Sample A Female 13.2
Sample B Female 10.1
Sample C Male 13.0
Sample D Male 8.1
Entorhinal cortex
nTPM: 8.2
Samples: 4

Max nTPM: 9.0
Min nTPM: 7.6
Sample A Female 7.6
Sample B Female 9.0
Sample C Male 8.4
Sample D Male 7.9
Subiculum
nTPM: 8.6
Samples: 4

Max nTPM: 9.0
Min nTPM: 8.2
Sample A Female 9.0
Sample B Female 8.8
Sample C Male 8.5
Sample D Male 8.2
Ventral hippocampus
nTPM: 9.8
Samples: 4

Max nTPM: 11.2
Min nTPM: 7.1
Sample A Female 9.7
Sample B Female 7.1
Sample C Male 11.1
Sample D Male 11.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 9.4
Min nTPM: 6.3
Sample A Male 9.4
Sample B Male 7.1
Sample C Female 7.6
Sample D Female 6.3
Hippocampal formation
nTPM: 8.7
Samples: 4

Max nTPM: 8.9
Min nTPM: 8.4
Sample A Male 8.9
Sample B Male 8.9
Sample C Female 8.5
Sample D Female 8.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70717980 Antisense, RP_050419_03_B11, Mouse strain C57BL/6J (56 days, male) 0.6

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