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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		92.278
RNA expressioni
Consensus:14.1 nTPM
HPA:14.1 nTPM
GTEx:13.8 nTPM
FANTOM5:177.8 Scaled Tags Per Million
Pig:46.4 nTPM
Mouse:34.5 nTPM
Allen mouse:14.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA030900
Amygdala mean intensity 92.278
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 88.426
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 90.102
Cortical amygdala 37.344
Central amygdala 87.419
Medial amygdaloid nucleus 92.278

AMYGDALA - HPA Brain RNA-seq
Max nTPM 14.1
Sample id Sample description nTPM
Amygdala
nTPM: 9.7
2514 Male, age 75, right hemisphere 17.7
2517 Female, age 94, left hemisphere 11.7
1987 Female, age 91, left hemisphere 9.2
2695 Female, age 67, right hemisphere 6.2
2814 Male, age 76, right hemisphere 3.9
Basal amygdala
nTPM: 11.0
2243 Female, age 91, right hemisphere 22.0
2609 Male, age 75, right hemisphere 12.6
1955 Male, age 76, both hemispheres 10.1
2685 Female, age 94, left hemisphere 9.7
2110 Male, age 80, left hemisphere 8.6
2827 Female, age 67, right hemisphere 3.3
Central amygdala
nTPM: 7.2
2239 Male, age 80, left hemisphere 12.8
2701 Female, age 91, right hemisphere 8.1
2515 Male, age 75, right hemisphere 7.3
2826 Female, age 94, left hemisphere 6.9
1905 Male, age 76, both hemispheres 0.7
Corticomedial amygdala
nTPM: 14.1
2829 Male, age 80, left hemisphere 22.5
2242 Female, age 91, right hemisphere 16.4
2429 Female, age 94, left hemisphere 15.7
2240 Male, age 76, both hemispheres 13.9
2428 Male, age 75, right hemisphere 11.9
2535 Female, age 67, right hemisphere 4.1
Lateral amygdala
nTPM: 6.4
2516 Male, age 75, right hemisphere 14.5
2534 Female, age 94, left hemisphere 9.7
2256 Male, age 80, left hemisphere 6.7
2255 Female, age 91, right hemisphere 4.3
1883 Male, age 76, both hemispheres 2.0
2830 Female, age 67, right hemisphere 1.3
Stria terminalis, bed nucleus
nTPM: 12.1
2201 Male, age 74, unknown 12.9
1974 Female, age 91, both hemispheres 12.7
2486 Female, age 94, both hemispheres 10.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 13.8
Samples: 152

Max nTPM: 23.4
Min nTPM: 4.7
Std nTPM: 3.6
Median nTPM: 13.4
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 23.4
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 23.4
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 22.4
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 22.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 22.0
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 21.0
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 21.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 20.9
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 20.7
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 20.2
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 20.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 177.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 177.8
FF:10151-102I7 76 years, female 177.8

AMYGDALA - Pig RNA-seqi
Average nTPM 46.4
Pig sample Sample description nTPM
Amygdala
nTPM: 46.4
Samples: 4

Max nTPM: 66.6
Min nTPM: 29.0
Sample A Female 66.6
Sample B Female 34.1
Sample C Male 29.0
Sample D Male 56.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 34.5
Mouse sample Sample description nTPM
Amygdala
nTPM: 34.5
Samples: 4

Max nTPM: 42.4
Min nTPM: 25.6
Sample A Male 42.4
Sample B Male 34.3
Sample C Female 25.6
Sample D Female 35.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 14.8
683 Antisense, RP_Baylor_102923, Mouse strain C57BL/6J (56 days, male) 14.8
682 Antisense, RP_Baylor_102923, Mouse strain C57BL/6J (56 days, male) 12.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.