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L3MBTL4
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:11.5 nTPM
HPA:11.5 nTPM
GTEx:2.7 nTPM
FANTOM5:22.8 Scaled Tags Per Million
Mouse:0.7 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA064194
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 11.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4.8
2481 Female, age 94, left hemisphere 8.0
2288 Male, age 75, left hemisphere 5.8
2290 Female, age 72, unknown 5.7
1854 Male, age 80, left hemisphere 5.2
2289 Male, age 61, right hemisphere 4.4
1781 Male, age 74, unknown 3.6
1857 Female, age 85, left hemisphere 3.0
2846 Female, age 79, unknown 3.0
Claustrum
nTPM: 4.4
2292 Female, age 85, both hemispheres 8.5
1956 Male, age 74, unknown 6.4
2196 Female, age 79, unknown 6.0
2491 Male, age 75, both hemispheres 5.2
2392 Female, age 94, both hemispheres 4.2
2568 Male, age 61, both hemispheres 3.2
2198 Male, age 80, both hemispheres 3.0
2284 Female, age 91, both hemispheres 2.0
2645 Female, age 72, unknown 0.7
Globus pallidus, externus
nTPM: 11.5
2567 Female, age 72, unknown 13.9
2646 Male, age 61, right hemisphere 12.3
2772 Female, age 79, unknown 11.2
1996 Male, age 80, right hemisphere 11.1
2395 Male, age 75, both hemispheres 9.2
Globus pallidus, internus
nTPM: 9.3
2566 Female, age 72, unknown 12.9
2483 Female, age 94, right hemisphere 10.9
2287 Male, age 75, right hemisphere 10.8
2111 Female, age 85, right hemisphere 9.1
2037 Male, age 80, right hemisphere 8.6
2778 Female, age 91, both hemispheres 7.6
1818 Male, age 74, unknown 5.5
Nucleus accumbens
nTPM: 5.7
2732 Male, age 80, right hemisphere 10.9
2698 Female, age 72, unknown 8.4
1783 Male, age 74, unknown 5.2
2824 Male, age 61, right hemisphere 4.8
2286 Male, age 75, left hemisphere 4.4
1806 Female, age 85, left hemisphere 4.2
2391 Female, age 94, left hemisphere 4.1
1856 Female, age 91, right hemisphere 4.0
Nucleus basalis of Meynert
nTPM: 6.4
2569 Male, age 61, both hemispheres 12.0
2821 Male, age 75, both hemispheres 4.8
2393 Male, age 80, right hemisphere 4.7
2484 Female, age 94, left hemisphere 4.1
Nucleus of the diagonal band
nTPM: 3.8
1979 Male, age 74, unknown 6.2
2029 Male, age 61, right hemisphere 4.6
2775 Male, age 80, right hemisphere 3.9
1812 Female, age 91, both hemispheres 3.0
2195 Female, age 85, both hemispheres 1.4
Olfactory tubercle
nTPM: 2.8
2487 Female, age 94, left hemisphere 3.7
1846 Male, age 80, right hemisphere 3.3
1998 Female, age 91, both hemispheres 2.8
2856 Male, age 75, right hemisphere 1.5
Putamen
nTPM: 3.7
2647 Male, age 75, left hemisphere 5.6
2482 Female, age 94, left hemisphere 4.8
1937 Female, age 91, right hemisphere 4.2
1829 Male, age 74, unknown 3.6
1838 Male, age 80, right hemisphere 3.3
2489 Female, age 72, unknown 2.6
2466 Female, age 79, unknown 1.8
Septal nuclei
nTPM: 3.5
2031 Female, age 72, unknown 5.2
2629 Female, age 94, right hemisphere 4.6
2394 Male, age 61, left hemisphere 4.5
2009 Female, age 91, both hemispheres 4.2
2199 Male, age 80, right hemisphere 3.1
2059 Female, age 85, both hemispheres 2.2
1960 Male, age 74, unknown 1.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 2.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 2.5
Samples: 246

Max nTPM: 5.6
Min nTPM: 1.1
Std nTPM: 0.6
Median nTPM: 2.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 5.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 5.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 4.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 4.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 4.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 4.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 3.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 3.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 3.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 3.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 3.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 2.7
Samples: 246

Max nTPM: 7.5
Min nTPM: 1.2
Std nTPM: 0.7
Median nTPM: 2.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 7.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 6.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 5.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 5.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 4.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 4.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 4.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 4.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 3.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 3.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 3.9
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Brain - Putamen (basal ganglia)
Average nTPM: 2.5
Samples: 205

Max nTPM: 5.7
Min nTPM: 1.0
Std nTPM: 0.6
Median nTPM: 2.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 5.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 4.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 4.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 4.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 4.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 3.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 3.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 3.9
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 13.8
FF:10164-103B2 76 years, female 13.8
Globus pallidus
Scaled Tags Per Million: 22.8
FF:10161-103A8 76 years, female 24.3
FF:10175-103C4 60 years, female 21.3
Nucleus accumbens
Scaled Tags Per Million: 13.1
FF:10037-101F1 23-56 years, mixed 13.1
Putamen
Scaled Tags Per Million: 13.2
FF:10176-103C5 60 years, female 13.2

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 0.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 0.5
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.3
Sample A Male 0.3
Sample B Male 0.7
Sample C Female 0.6
Sample D Female 0.5
Septum
nTPM: 0.4
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.2
Sample A Male 0.5
Sample B Male 0.2
Sample C Female 0.5
Sample D Female 0.4
Ventral forebrain
nTPM: 0.7
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.3
Sample A Male 1.0
Sample B Male 0.3
Sample C Female 0.5
Sample D Female 0.8

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
71494726 Antisense, RP_050913_03_B09, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
71494726 Antisense, RP_050913_03_B09, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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