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HSPA13
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:13.9 nTPM
HPA:13.9 nTPM
GTEx:12.5 nTPM
FANTOM5:64.7 Scaled Tags Per Million
Pig:56.8 nTPM
Mouse:32.9 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014797
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.9
1898 Male, age 80, left hemisphere 14.4
1855 Male, age 76, left hemisphere 10.9
1911 Female, age 85, right hemisphere 9.5
2529 Female, age 94, left hemisphere 8.8
2621 Female, age 67, right hemisphere 8.4
2148 Female, age 91, left hemisphere 7.3
Dentate gyrus
nTPM: 10.2
1927 Female, age 91, both hemispheres 13.1
2010 Male, age 76, both hemispheres 12.2
2528 Male, age 74, both hemispheres 10.6
2246 Female, age 85, both hemispheres 9.4
2530 Female, age 94, left hemisphere 8.8
2531 Female, age 67, both hemispheres 6.9
Entorhinal gyrus
nTPM: 9.6
1938 Female, age 85, left hemisphere 12.5
1787 Male, age 76, left hemisphere 10.3
2613 Female, age 94, left hemisphere 9.7
2764 Male, age 80, right hemisphere 9.6
2117 Female, age 91, right hemisphere 8.7
2686 Male, age 75, right hemisphere 6.7
Hippocampus, CA1
nTPM: 11.4
2749 Male, age 80, left hemisphere 15.9
1873 Female, age 85, both hemispheres 11.6
2045 Male, age 76, both hemispheres 10.8
2527 Male, age 74, both hemispheres 10.3
2082 Female, age 91, right hemisphere 8.6
Hippocampus, CA2
nTPM: 10.3
1892 Male, age 76, both hemispheres 13.9
1963 Male, age 80, left hemisphere 10.8
2249 Male, age 74, both hemispheres 10.7
1940 Female, age 85, left hemisphere 9.5
2113 Female, age 91, right hemisphere 8.9
2437 Female, age 94, left hemisphere 8.2
Hippocampus, CA3
nTPM: 10.8
2137 Male, age 80, left hemisphere 15.7
1867 Male, age 76, both hemispheres 13.0
2436 Male, age 74, both hemispheres 11.5
1891 Female, age 85, both hemispheres 10.6
2620 Female, age 94, left hemisphere 8.0
2861 Female, age 67, both hemispheres 6.0
Parahippocampal cortex
nTPM: 10.7
1850 Male, age 80, both hemispheres 14.7
1990 Female, age 91, right hemisphere 12.5
2250 Female, age 67, right hemisphere 12.5
2693 Female, age 94, both hemispheres 11.9
1933 Female, age 85, both hemispheres 11.5
2018 Male, age 76, both hemispheres 10.6
2245 Female, age 91, both hemispheres 9.8
2532 Female, age 72, left hemisphere 9.2
2692 Male, age 74, both hemispheres 7.9
2622 Female, age 67, right hemisphere 6.2
Perirhinal gyrus
nTPM: 13.9
1847 Female, age 91, left hemisphere 15.6
1841 Female, age 85, right hemisphere 14.9
2521 Female, age 94, right hemisphere 13.9
1794 Male, age 80, right hemisphere 13.8
2848 Male, age 76, right hemisphere 11.4
Subiculum
nTPM: 9.7
1901 Male, age 80, both hemispheres 12.5
1977 Female, age 85, both hemispheres 11.6
2438 Female, age 94, left hemisphere 9.3
2042 Male, age 76, both hemispheres 8.7
2729 Female, age 91, right hemisphere 8.2
2619 Male, age 74, both hemispheres 7.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 197

Max nTPM: 36.4
Min nTPM: 5.8
Std nTPM: 4.2
Median nTPM: 11.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 36.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 22.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 22.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 22.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 21.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 21.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 20.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 18.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 18.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.7
FF:10169-103B7 60 years, female 78.4
FF:10153-102I9 76 years, female 50.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.9
Samples: 4

Max nTPM: 67.2
Min nTPM: 41.4
Sample A Female 67.2
Sample B Female 61.1
Sample C Male 57.8
Sample D Male 41.4
Entorhinal cortex
nTPM: 50.3
Samples: 4

Max nTPM: 58.1
Min nTPM: 38.3
Sample A Female 55.2
Sample B Female 58.1
Sample C Male 49.7
Sample D Male 38.3
Subiculum
nTPM: 50.1
Samples: 4

Max nTPM: 61.0
Min nTPM: 43.5
Sample A Female 61.0
Sample B Female 43.5
Sample C Male 46.4
Sample D Male 49.3
Ventral hippocampus
nTPM: 48.0
Samples: 4

Max nTPM: 60.2
Min nTPM: 39.0
Sample A Female 60.2
Sample B Female 39.0
Sample C Male 41.2
Sample D Male 51.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 35.6
Min nTPM: 29.7
Sample A Male 29.7
Sample B Male 32.0
Sample C Female 33.3
Sample D Female 35.6
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 37.8
Min nTPM: 28.6
Sample A Male 37.8
Sample B Male 32.8
Sample C Female 32.6
Sample D Female 28.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
76003326 Antisense, RP_060608_02_B05, Mouse strain C57BL/6J (56 days, male) 0.1

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