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ELMO1
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:131.5 nTPM
HPA:131.5 nTPM
GTEx:81.8 nTPM
FANTOM5:329.3 Scaled Tags Per Million
Mouse:61.2 nTPM
Allen mouse:6.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 131.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 65.5
2288 Male, age 75, left hemisphere 99.0
1781 Male, age 74, unknown 76.4
2846 Female, age 79, unknown 75.5
1854 Male, age 80, left hemisphere 59.9
2481 Female, age 94, left hemisphere 56.1
1857 Female, age 85, left hemisphere 54.6
2290 Female, age 72, unknown 52.4
2289 Male, age 61, right hemisphere 50.2
Claustrum
nTPM: 96.3
2292 Female, age 85, both hemispheres 128.8
1956 Male, age 74, unknown 118.4
2196 Female, age 79, unknown 99.8
2392 Female, age 94, both hemispheres 96.2
2568 Male, age 61, both hemispheres 90.4
2198 Male, age 80, both hemispheres 88.0
2284 Female, age 91, both hemispheres 85.0
2645 Female, age 72, unknown 81.5
2491 Male, age 75, both hemispheres 78.9
Globus pallidus, externus
nTPM: 111.3
1996 Male, age 80, right hemisphere 118.7
2395 Male, age 75, both hemispheres 118.0
2567 Female, age 72, unknown 116.1
2772 Female, age 79, unknown 104.2
2646 Male, age 61, right hemisphere 99.5
Globus pallidus, internus
nTPM: 131.5
2111 Female, age 85, right hemisphere 180.9
2778 Female, age 91, both hemispheres 160.3
2287 Male, age 75, right hemisphere 137.6
2566 Female, age 72, unknown 132.5
2037 Male, age 80, right hemisphere 121.5
1818 Male, age 74, unknown 110.8
2483 Female, age 94, right hemisphere 76.8
Nucleus accumbens
nTPM: 85.9
2391 Female, age 94, left hemisphere 136.4
2698 Female, age 72, unknown 93.1
2732 Male, age 80, right hemisphere 89.1
2286 Male, age 75, left hemisphere 84.4
1783 Male, age 74, unknown 77.0
2824 Male, age 61, right hemisphere 74.9
1806 Female, age 85, left hemisphere 69.6
1856 Female, age 91, right hemisphere 62.9
Nucleus basalis of Meynert
nTPM: 77.9
2821 Male, age 75, both hemispheres 95.2
2569 Male, age 61, both hemispheres 79.0
2484 Female, age 94, left hemisphere 71.5
2393 Male, age 80, right hemisphere 66.0
Nucleus of the diagonal band
nTPM: 54.2
2029 Male, age 61, right hemisphere 62.7
1812 Female, age 91, both hemispheres 60.7
2195 Female, age 85, both hemispheres 51.8
2775 Male, age 80, right hemisphere 49.5
1979 Male, age 74, unknown 46.0
Olfactory tubercle
nTPM: 57.1
2487 Female, age 94, left hemisphere 61.7
1998 Female, age 91, both hemispheres 60.6
2856 Male, age 75, right hemisphere 55.3
1846 Male, age 80, right hemisphere 50.8
Putamen
nTPM: 76.0
2482 Female, age 94, left hemisphere 93.5
2647 Male, age 75, left hemisphere 88.5
1829 Male, age 74, unknown 81.4
1937 Female, age 91, right hemisphere 78.6
2489 Female, age 72, unknown 71.8
2466 Female, age 79, unknown 64.3
1838 Male, age 80, right hemisphere 54.1
Septal nuclei
nTPM: 63.0
2394 Male, age 61, left hemisphere 91.9
2629 Female, age 94, right hemisphere 73.5
2199 Male, age 80, right hemisphere 65.8
2031 Female, age 72, unknown 54.2
1960 Male, age 74, unknown 53.7
2009 Female, age 91, both hemispheres 51.4
2059 Female, age 85, both hemispheres 50.8

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 81.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 68.9
Samples: 246

Max nTPM: 127.2
Min nTPM: 14.9
Std nTPM: 23.4
Median nTPM: 70.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 127.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 122.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 121.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 120.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 119.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 119.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 112.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 112.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 109.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 107.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 106.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 81.8
Samples: 246

Max nTPM: 147.3
Min nTPM: 12.7
Std nTPM: 28.7
Median nTPM: 88.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 147.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 139.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 136.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 128.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 127.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 125.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 123.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 123.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 123.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 121.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 118.9
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Brain - Putamen (basal ganglia)
Average nTPM: 73.7
Samples: 205

Max nTPM: 172.1
Min nTPM: 19.6
Std nTPM: 25.3
Median nTPM: 74.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 172.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 126.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 124.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 117.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 116.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 114.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 114.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 112.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 112.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 110.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 110.0
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 329.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 190.9
FF:10164-103B2 76 years, female 190.9
Globus pallidus
Scaled Tags Per Million: 204.3
FF:10161-103A8 76 years, female 244.4
FF:10175-103C4 60 years, female 164.1
Nucleus accumbens
Scaled Tags Per Million: 329.3
FF:10037-101F1 23-56 years, mixed 329.3
Putamen
Scaled Tags Per Million: 234.3
FF:10176-103C5 60 years, female 234.3

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 61.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 61.2
Samples: 4

Max nTPM: 63.9
Min nTPM: 59.0
Sample A Male 60.9
Sample B Male 59.0
Sample C Female 63.9
Sample D Female 61.0
Septum
nTPM: 43.3
Samples: 4

Max nTPM: 47.7
Min nTPM: 37.4
Sample A Male 47.7
Sample B Male 37.4
Sample C Female 43.5
Sample D Female 44.4
Ventral forebrain
nTPM: 49.2
Samples: 4

Max nTPM: 57.0
Min nTPM: 43.6
Sample A Male 43.6
Sample B Male 57.0
Sample C Female 48.4
Sample D Female 47.7

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.3
70743907 Antisense, RP_050725_02_A11, Mouse strain C57BL/6J (56 days, male) 7.0
67792193 Antisense, RP_040920_01_C11, Mouse strain C57BL/6J (56 days, male) 3.6
Pallidum
Expression energy: 6.1
70743907 Antisense, RP_050725_02_A11, Mouse strain C57BL/6J (56 days, male) 6.9
67792193 Antisense, RP_040920_01_C11, Mouse strain C57BL/6J (56 days, male) 5.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.