ABOUTMENU
HELP
NEWS
ELMO1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:82.9 nTPM
HPA:82.9 nTPM
GTEx:85.5 nTPM
FANTOM5:146.6 Scaled Tags Per Million
Mouse:28.7 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.9
Sample id Sample description nTPM
Hippocampus
nTPM: 55.4
2621 Female, age 67, right hemisphere 69.0
1911 Female, age 85, right hemisphere 62.8
2529 Female, age 94, left hemisphere 60.0
1855 Male, age 76, left hemisphere 48.5
1898 Male, age 80, left hemisphere 48.2
2148 Female, age 91, left hemisphere 43.8
Dentate gyrus
nTPM: 58.9
2530 Female, age 94, left hemisphere 91.5
2010 Male, age 76, both hemispheres 60.8
2528 Male, age 74, both hemispheres 60.8
2246 Female, age 85, both hemispheres 53.9
2531 Female, age 67, both hemispheres 45.7
1927 Female, age 91, both hemispheres 40.8
Entorhinal gyrus
nTPM: 73.3
2613 Female, age 94, left hemisphere 88.7
2117 Female, age 91, right hemisphere 85.1
2764 Male, age 80, right hemisphere 75.9
1787 Male, age 76, left hemisphere 70.7
1938 Female, age 85, left hemisphere 67.4
2686 Male, age 75, right hemisphere 51.9
Hippocampus, CA1
nTPM: 49.0
2749 Male, age 80, left hemisphere 58.9
2082 Female, age 91, right hemisphere 57.3
2527 Male, age 74, both hemispheres 53.1
1873 Female, age 85, both hemispheres 51.0
2045 Male, age 76, both hemispheres 24.7
Hippocampus, CA2
nTPM: 68.4
2437 Female, age 94, left hemisphere 80.6
1940 Female, age 85, left hemisphere 79.5
1963 Male, age 80, left hemisphere 68.3
2249 Male, age 74, both hemispheres 63.0
2113 Female, age 91, right hemisphere 62.0
1892 Male, age 76, both hemispheres 56.8
Hippocampus, CA3
nTPM: 48.3
1891 Female, age 85, both hemispheres 73.9
1867 Male, age 76, both hemispheres 62.7
2137 Male, age 80, left hemisphere 61.6
2436 Male, age 74, both hemispheres 46.3
2861 Female, age 67, both hemispheres 26.5
2620 Female, age 94, left hemisphere 19.1
Parahippocampal cortex
nTPM: 64.6
2532 Female, age 72, left hemisphere 85.0
1990 Female, age 91, right hemisphere 82.3
2692 Male, age 74, both hemispheres 74.6
1850 Male, age 80, both hemispheres 68.5
2245 Female, age 91, both hemispheres 67.4
2018 Male, age 76, both hemispheres 65.2
1933 Female, age 85, both hemispheres 57.8
2693 Female, age 94, both hemispheres 57.1
2250 Female, age 67, right hemisphere 49.6
2622 Female, age 67, right hemisphere 38.6
Perirhinal gyrus
nTPM: 62.5
2521 Female, age 94, right hemisphere 76.4
1841 Female, age 85, right hemisphere 63.0
1847 Female, age 91, left hemisphere 62.7
1794 Male, age 80, right hemisphere 59.8
2848 Male, age 76, right hemisphere 50.5
Subiculum
nTPM: 82.9
2438 Female, age 94, left hemisphere 99.9
2042 Male, age 76, both hemispheres 99.4
1901 Male, age 80, both hemispheres 96.3
1977 Female, age 85, both hemispheres 76.0
2619 Male, age 74, both hemispheres 74.2
2729 Female, age 91, right hemisphere 51.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 85.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 85.5
Samples: 197

Max nTPM: 230.6
Min nTPM: 21.4
Std nTPM: 31.9
Median nTPM: 84.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 230.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 173.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 165.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 164.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 157.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 146.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 141.2
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 139.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 136.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 135.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 133.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 146.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 146.6
FF:10153-102I9 76 years, female 163.6
FF:10169-103B7 60 years, female 129.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 34.4
Min nTPM: 26.6
Sample A Male 27.2
Sample B Male 26.6
Sample C Female 26.6
Sample D Female 34.4
Hippocampal formation
nTPM: 18.3
Samples: 4

Max nTPM: 19.9
Min nTPM: 16.1
Sample A Male 19.5
Sample B Male 16.1
Sample C Female 19.9
Sample D Female 17.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
70743907 Antisense, RP_050725_02_A11, Mouse strain C57BL/6J (56 days, male) 2.9
67792193 Antisense, RP_040920_01_C11, Mouse strain C57BL/6J (56 days, male) 1.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.