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VBP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:49.5 nTPM
HPA:49.5 nTPM
GTEx:56.6 nTPM
FANTOM5:97.9 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:101.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023230Antibody CAB006260
Glial cells MediumMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.5
Sample id Sample description nTPM
Hippocampus
nTPM: 47.0
1898 Male, age 80, left hemisphere 53.3
1855 Male, age 76, left hemisphere 49.2
1911 Female, age 85, right hemisphere 46.9
2529 Female, age 94, left hemisphere 45.0
2621 Female, age 67, right hemisphere 44.3
2148 Female, age 91, left hemisphere 43.4
Dentate gyrus
nTPM: 47.1
2010 Male, age 76, both hemispheres 51.6
1927 Female, age 91, both hemispheres 50.4
2530 Female, age 94, left hemisphere 46.9
2528 Male, age 74, both hemispheres 46.5
2246 Female, age 85, both hemispheres 45.4
2531 Female, age 67, both hemispheres 41.9
Entorhinal gyrus
nTPM: 45.3
1938 Female, age 85, left hemisphere 48.4
2117 Female, age 91, right hemisphere 46.8
2764 Male, age 80, right hemisphere 45.2
1787 Male, age 76, left hemisphere 44.7
2613 Female, age 94, left hemisphere 43.6
2686 Male, age 75, right hemisphere 43.4
Hippocampus, CA1
nTPM: 49.5
2749 Male, age 80, left hemisphere 55.8
1873 Female, age 85, both hemispheres 52.6
2045 Male, age 76, both hemispheres 48.6
2527 Male, age 74, both hemispheres 46.1
2082 Female, age 91, right hemisphere 44.4
Hippocampus, CA2
nTPM: 48.4
1892 Male, age 76, both hemispheres 54.5
1963 Male, age 80, left hemisphere 52.3
2249 Male, age 74, both hemispheres 48.5
1940 Female, age 85, left hemisphere 45.7
2437 Female, age 94, left hemisphere 45.6
2113 Female, age 91, right hemisphere 44.0
Hippocampus, CA3
nTPM: 46.6
1867 Male, age 76, both hemispheres 51.6
1891 Female, age 85, both hemispheres 49.4
2137 Male, age 80, left hemisphere 49.1
2436 Male, age 74, both hemispheres 45.7
2620 Female, age 94, left hemisphere 42.9
2861 Female, age 67, both hemispheres 41.2
Parahippocampal cortex
nTPM: 45.9
1850 Male, age 80, both hemispheres 50.4
1933 Female, age 85, both hemispheres 48.5
2018 Male, age 76, both hemispheres 47.7
2250 Female, age 67, right hemisphere 47.3
1990 Female, age 91, right hemisphere 47.1
2693 Female, age 94, both hemispheres 46.1
2692 Male, age 74, both hemispheres 44.7
2245 Female, age 91, both hemispheres 43.5
2532 Female, age 72, left hemisphere 42.7
2622 Female, age 67, right hemisphere 40.8
Perirhinal gyrus
nTPM: 48.0
1841 Female, age 85, right hemisphere 50.3
1847 Female, age 91, left hemisphere 49.5
2848 Male, age 76, right hemisphere 47.4
1794 Male, age 80, right hemisphere 46.7
2521 Female, age 94, right hemisphere 46.0
Subiculum
nTPM: 46.6
1901 Male, age 80, both hemispheres 49.3
1977 Female, age 85, both hemispheres 48.8
2042 Male, age 76, both hemispheres 48.2
2619 Male, age 74, both hemispheres 44.7
2729 Female, age 91, right hemisphere 44.5
2438 Female, age 94, left hemisphere 44.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.6
Samples: 197

Max nTPM: 125.9
Min nTPM: 29.0
Std nTPM: 12.6
Median nTPM: 54.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 125.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 119.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 97.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 97.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 96.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 87.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 77.6
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 76.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 76.0
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 75.7
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 75.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.9
FF:10169-103B7 60 years, female 133.9
FF:10153-102I9 76 years, female 61.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 27.7
Min nTPM: 15.9
Sample A Female 27.7
Sample B Female 18.6
Sample C Male 20.1
Sample D Male 15.9
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 22.6
Min nTPM: 14.8
Sample A Female 18.6
Sample B Female 22.6
Sample C Male 17.6
Sample D Male 14.8
Subiculum
nTPM: 18.3
Samples: 4

Max nTPM: 23.4
Min nTPM: 15.2
Sample A Female 23.4
Sample B Female 17.5
Sample C Male 15.2
Sample D Male 17.0
Ventral hippocampus
nTPM: 18.0
Samples: 4

Max nTPM: 22.2
Min nTPM: 14.7
Sample A Female 22.2
Sample B Female 14.7
Sample C Male 17.4
Sample D Male 17.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 101.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.8
Samples: 4

Max nTPM: 97.8
Min nTPM: 80.6
Sample A Male 80.6
Sample B Male 94.4
Sample C Female 97.8
Sample D Female 86.2
Hippocampal formation
nTPM: 101.2
Samples: 4

Max nTPM: 115.0
Min nTPM: 95.7
Sample A Male 115.0
Sample B Male 95.9
Sample C Female 95.7
Sample D Female 98.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.