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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:13.9 nTPM
HPA:13.9 nTPM
GTEx:14.4 nTPM
FANTOM5:29.4 Scaled Tags Per Million
Pig:18.3 nTPM
Mouse:82.5 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038391Antibody HPA038409Antibody CAB032876
Glial cells Not detectedNot detectedMedium
Neuronal cells LowLowMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.9
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
1911 Female, age 85, right hemisphere 13.1
1898 Male, age 80, left hemisphere 12.8
2529 Female, age 94, left hemisphere 12.6
2621 Female, age 67, right hemisphere 11.9
2148 Female, age 91, left hemisphere 10.8
1855 Male, age 76, left hemisphere 10.7
Dentate gyrus
nTPM: 12.0
2528 Male, age 74, both hemispheres 12.7
2246 Female, age 85, both hemispheres 12.4
1927 Female, age 91, both hemispheres 12.0
2010 Male, age 76, both hemispheres 12.0
2531 Female, age 67, both hemispheres 11.8
2530 Female, age 94, left hemisphere 11.1
Entorhinal gyrus
nTPM: 12.7
1938 Female, age 85, left hemisphere 13.3
1787 Male, age 76, left hemisphere 12.9
2117 Female, age 91, right hemisphere 12.7
2686 Male, age 75, right hemisphere 12.7
2764 Male, age 80, right hemisphere 12.6
2613 Female, age 94, left hemisphere 12.0
Hippocampus, CA1
nTPM: 12.0
2749 Male, age 80, left hemisphere 13.3
2527 Male, age 74, both hemispheres 12.0
1873 Female, age 85, both hemispheres 11.8
2045 Male, age 76, both hemispheres 11.4
2082 Female, age 91, right hemisphere 11.4
Hippocampus, CA2
nTPM: 12.3
1892 Male, age 76, both hemispheres 13.7
1940 Female, age 85, left hemisphere 12.7
2249 Male, age 74, both hemispheres 12.7
2437 Female, age 94, left hemisphere 11.8
2113 Female, age 91, right hemisphere 11.6
1963 Male, age 80, left hemisphere 10.9
Hippocampus, CA3
nTPM: 12.1
1891 Female, age 85, both hemispheres 13.5
1867 Male, age 76, both hemispheres 12.7
2436 Male, age 74, both hemispheres 12.3
2137 Male, age 80, left hemisphere 12.1
2620 Female, age 94, left hemisphere 11.6
2861 Female, age 67, both hemispheres 10.1
Parahippocampal cortex
nTPM: 13.0
1850 Male, age 80, both hemispheres 15.0
1933 Female, age 85, both hemispheres 14.5
2250 Female, age 67, right hemisphere 13.5
1990 Female, age 91, right hemisphere 13.4
2692 Male, age 74, both hemispheres 12.8
2693 Female, age 94, both hemispheres 12.7
2018 Male, age 76, both hemispheres 12.6
2622 Female, age 67, right hemisphere 12.3
2245 Female, age 91, both hemispheres 11.5
2532 Female, age 72, left hemisphere 11.3
Perirhinal gyrus
nTPM: 13.9
1794 Male, age 80, right hemisphere 14.4
1847 Female, age 91, left hemisphere 14.4
1841 Female, age 85, right hemisphere 14.3
2521 Female, age 94, right hemisphere 13.5
2848 Male, age 76, right hemisphere 12.7
Subiculum
nTPM: 11.4
1977 Female, age 85, both hemispheres 12.5
1901 Male, age 80, both hemispheres 12.4
2729 Female, age 91, right hemisphere 11.8
2619 Male, age 74, both hemispheres 11.5
2042 Male, age 76, both hemispheres 11.4
2438 Female, age 94, left hemisphere 9.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.4
Samples: 197

Max nTPM: 29.4
Min nTPM: 7.6
Std nTPM: 3.2
Median nTPM: 13.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 29.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 24.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 24.4
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 23.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 22.5
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 22.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 21.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 21.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 20.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 19.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 19.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.4
FF:10153-102I9 76 years, female 31.6
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 16.7
Min nTPM: 14.1
Sample A Female 16.7
Sample B Female 15.6
Sample C Male 16.4
Sample D Male 14.1
Entorhinal cortex
nTPM: 18.3
Samples: 4

Max nTPM: 22.2
Min nTPM: 16.0
Sample A Female 16.8
Sample B Female 22.2
Sample C Male 18.3
Sample D Male 16.0
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 16.1
Min nTPM: 11.4
Sample A Female 16.1
Sample B Female 13.4
Sample C Male 11.4
Sample D Male 14.4
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.2
Min nTPM: 9.5
Sample A Female 12.9
Sample B Female 12.5
Sample C Male 9.5
Sample D Male 15.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 82.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.5
Samples: 4

Max nTPM: 91.2
Min nTPM: 73.9
Sample A Male 83.7
Sample B Male 81.2
Sample C Female 91.2
Sample D Female 73.9
Hippocampal formation
nTPM: 72.5
Samples: 4

Max nTPM: 81.2
Min nTPM: 63.9
Sample A Male 81.2
Sample B Male 63.9
Sample C Female 66.3
Sample D Female 78.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
70928196 Antisense, RP_050725_01_B11, Mouse strain C57BL/6J (56 days, male) 4.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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