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COPG2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
RNA expressioni
Consensus:15.5 nTPM
HPA:15.5 nTPM
GTEx:8.5 nTPM
FANTOM5:25.7 Scaled Tags Per Million
Pig:38.1 nTPM
Mouse:57.9 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045712
Glial cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.5
Sample id Sample description nTPM
Hippocampus
nTPM: 5.0
1898 Male, age 80, left hemisphere 11.2
1855 Male, age 76, left hemisphere 7.9
2621 Female, age 67, right hemisphere 4.5
2148 Female, age 91, left hemisphere 3.1
2529 Female, age 94, left hemisphere 2.8
1911 Female, age 85, right hemisphere 0.4
Dentate gyrus
nTPM: 5.7
2246 Female, age 85, both hemispheres 8.6
1927 Female, age 91, both hemispheres 7.2
2010 Male, age 76, both hemispheres 5.8
2528 Male, age 74, both hemispheres 5.1
2531 Female, age 67, both hemispheres 4.9
2530 Female, age 94, left hemisphere 2.7
Entorhinal gyrus
nTPM: 9.0
1938 Female, age 85, left hemisphere 12.4
2764 Male, age 80, right hemisphere 11.9
1787 Male, age 76, left hemisphere 10.4
2613 Female, age 94, left hemisphere 9.7
2686 Male, age 75, right hemisphere 5.9
2117 Female, age 91, right hemisphere 3.6
Hippocampus, CA1
nTPM: 7.3
2045 Male, age 76, both hemispheres 8.8
2749 Male, age 80, left hemisphere 8.3
1873 Female, age 85, both hemispheres 7.2
2082 Female, age 91, right hemisphere 7.2
2527 Male, age 74, both hemispheres 4.9
Hippocampus, CA2
nTPM: 6.9
1892 Male, age 76, both hemispheres 9.7
1963 Male, age 80, left hemisphere 9.7
1940 Female, age 85, left hemisphere 8.4
2437 Female, age 94, left hemisphere 5.0
2113 Female, age 91, right hemisphere 4.4
2249 Male, age 74, both hemispheres 4.3
Hippocampus, CA3
nTPM: 4.6
2620 Female, age 94, left hemisphere 8.2
2137 Male, age 80, left hemisphere 5.6
2436 Male, age 74, both hemispheres 4.2
1867 Male, age 76, both hemispheres 3.9
1891 Female, age 85, both hemispheres 3.3
2861 Female, age 67, both hemispheres 2.3
Parahippocampal cortex
nTPM: 9.3
1850 Male, age 80, both hemispheres 15.2
1933 Female, age 85, both hemispheres 12.3
2693 Female, age 94, both hemispheres 12.1
2245 Female, age 91, both hemispheres 10.3
2250 Female, age 67, right hemisphere 10.1
1990 Female, age 91, right hemisphere 9.3
2532 Female, age 72, left hemisphere 8.7
2692 Male, age 74, both hemispheres 5.4
2018 Male, age 76, both hemispheres 5.3
2622 Female, age 67, right hemisphere 4.9
Perirhinal gyrus
nTPM: 15.5
1847 Female, age 91, left hemisphere 17.6
1794 Male, age 80, right hemisphere 16.4
2848 Male, age 76, right hemisphere 16.0
2521 Female, age 94, right hemisphere 14.4
1841 Female, age 85, right hemisphere 13.3
Subiculum
nTPM: 4.2
1977 Female, age 85, both hemispheres 10.0
2438 Female, age 94, left hemisphere 4.4
2619 Male, age 74, both hemispheres 4.0
1901 Male, age 80, both hemispheres 3.7
2729 Female, age 91, right hemisphere 3.3
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.5
Samples: 197

Max nTPM: 12.6
Min nTPM: 3.3
Std nTPM: 1.3
Median nTPM: 8.6
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 12.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 11.8
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 11.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.8
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 10.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 10.6
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 10.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 10.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 10.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 10.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 10.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.7
FF:10169-103B7 60 years, female 32.4
FF:10153-102I9 76 years, female 18.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 36.3
Samples: 4

Max nTPM: 40.2
Min nTPM: 28.7
Sample A Female 40.2
Sample B Female 37.6
Sample C Male 38.8
Sample D Male 28.7
Entorhinal cortex
nTPM: 34.0
Samples: 4

Max nTPM: 36.7
Min nTPM: 30.0
Sample A Female 34.3
Sample B Female 36.7
Sample C Male 34.9
Sample D Male 30.0
Subiculum
nTPM: 38.2
Samples: 4

Max nTPM: 47.0
Min nTPM: 30.0
Sample A Female 47.0
Sample B Female 36.2
Sample C Male 39.4
Sample D Male 30.0
Ventral hippocampus
nTPM: 36.3
Samples: 4

Max nTPM: 43.8
Min nTPM: 30.4
Sample A Female 36.1
Sample B Female 30.4
Sample C Male 43.8
Sample D Male 34.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 50.4
Samples: 4

Max nTPM: 53.1
Min nTPM: 48.9
Sample A Male 48.9
Sample B Male 49.0
Sample C Female 50.7
Sample D Female 53.1
Hippocampal formation
nTPM: 57.9
Samples: 4

Max nTPM: 60.3
Min nTPM: 53.6
Sample A Male 60.3
Sample B Male 58.1
Sample C Female 59.5
Sample D Female 53.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
74819259 Antisense, RP_060315_02_D11, Mouse strain C57BL/6J (56 days, male) 4.0
68745335 Antisense, RP_050210_01_G02, Mouse strain C57BL/6J (56 days, male) 3.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.