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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:142.1 nTPM
HPA:142.1 nTPM
GTEx:167.7 nTPM
FANTOM5:239.2 Scaled Tags Per Million
Pig:104.1 nTPM
Mouse:178.3 nTPM
Allen mouse:12.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024290Antibody HPA058487
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 142.1
Sample id Sample description nTPM
Hippocampus
nTPM: 48.7
2621 Female, age 67, right hemisphere 76.1
1898 Male, age 80, left hemisphere 63.3
2148 Female, age 91, left hemisphere 59.4
2529 Female, age 94, left hemisphere 49.0
1911 Female, age 85, right hemisphere 24.8
1855 Male, age 76, left hemisphere 19.5
Dentate gyrus
nTPM: 51.4
2531 Female, age 67, both hemispheres 94.0
1927 Female, age 91, both hemispheres 72.6
2246 Female, age 85, both hemispheres 49.7
2530 Female, age 94, left hemisphere 46.5
2528 Male, age 74, both hemispheres 32.9
2010 Male, age 76, both hemispheres 12.8
Entorhinal gyrus
nTPM: 121.2
2613 Female, age 94, left hemisphere 211.8
2764 Male, age 80, right hemisphere 155.4
2686 Male, age 75, right hemisphere 118.3
1938 Female, age 85, left hemisphere 101.4
1787 Male, age 76, left hemisphere 94.2
2117 Female, age 91, right hemisphere 46.1
Hippocampus, CA1
nTPM: 65.4
2749 Male, age 80, left hemisphere 123.4
2527 Male, age 74, both hemispheres 68.9
2082 Female, age 91, right hemisphere 64.3
2045 Male, age 76, both hemispheres 38.1
1873 Female, age 85, both hemispheres 32.5
Hippocampus, CA2
nTPM: 50.8
2113 Female, age 91, right hemisphere 65.5
2437 Female, age 94, left hemisphere 64.1
1963 Male, age 80, left hemisphere 51.4
1940 Female, age 85, left hemisphere 47.0
1892 Male, age 76, both hemispheres 44.5
2249 Male, age 74, both hemispheres 32.1
Hippocampus, CA3
nTPM: 67.4
2137 Male, age 80, left hemisphere 113.4
2620 Female, age 94, left hemisphere 111.2
2861 Female, age 67, both hemispheres 110.8
1867 Male, age 76, both hemispheres 31.2
2436 Male, age 74, both hemispheres 25.4
1891 Female, age 85, both hemispheres 12.5
Parahippocampal cortex
nTPM: 107.6
2622 Female, age 67, right hemisphere 177.0
2245 Female, age 91, both hemispheres 154.2
1850 Male, age 80, both hemispheres 131.5
2693 Female, age 94, both hemispheres 118.3
2532 Female, age 72, left hemisphere 103.3
1990 Female, age 91, right hemisphere 95.5
1933 Female, age 85, both hemispheres 87.8
2692 Male, age 74, both hemispheres 85.6
2250 Female, age 67, right hemisphere 73.7
2018 Male, age 76, both hemispheres 49.3
Perirhinal gyrus
nTPM: 142.1
1794 Male, age 80, right hemisphere 180.9
1847 Female, age 91, left hemisphere 169.4
2521 Female, age 94, right hemisphere 127.4
2848 Male, age 76, right hemisphere 124.5
1841 Female, age 85, right hemisphere 108.1
Subiculum
nTPM: 50.4
2619 Male, age 74, both hemispheres 81.9
1977 Female, age 85, both hemispheres 71.7
2438 Female, age 94, left hemisphere 57.4
1901 Male, age 80, both hemispheres 49.5
2729 Female, age 91, right hemisphere 34.7
2042 Male, age 76, both hemispheres 7.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 167.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 167.7
Samples: 197

Max nTPM: 525.7
Min nTPM: 14.3
Std nTPM: 98.1
Median nTPM: 156.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 525.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 516.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 431.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 428.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 423.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 403.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 386.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 369.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 366.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 360.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 347.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 239.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 239.2
FF:10169-103B7 60 years, female 252.1
FF:10153-102I9 76 years, female 226.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 104.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.7
Samples: 4

Max nTPM: 100.1
Min nTPM: 60.4
Sample A Female 100.1
Sample B Female 92.2
Sample C Male 60.4
Sample D Male 66.0
Entorhinal cortex
nTPM: 104.1
Samples: 4

Max nTPM: 131.3
Min nTPM: 92.6
Sample A Female 131.3
Sample B Female 92.6
Sample C Male 96.6
Sample D Male 95.9
Subiculum
nTPM: 79.4
Samples: 4

Max nTPM: 111.2
Min nTPM: 64.4
Sample A Female 111.2
Sample B Female 66.5
Sample C Male 75.6
Sample D Male 64.4
Ventral hippocampus
nTPM: 78.7
Samples: 4

Max nTPM: 114.3
Min nTPM: 53.0
Sample A Female 62.4
Sample B Female 53.0
Sample C Male 84.9
Sample D Male 114.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 178.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 178.3
Samples: 4

Max nTPM: 191.4
Min nTPM: 160.8
Sample A Male 174.6
Sample B Male 191.4
Sample C Female 160.8
Sample D Female 186.3
Hippocampal formation
nTPM: 158.1
Samples: 4

Max nTPM: 172.7
Min nTPM: 147.8
Sample A Male 147.8
Sample B Male 158.6
Sample C Female 172.7
Sample D Female 153.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.9
79544804 Antisense, RP_071018_01_E09, Mouse strain C57BL/6J (56 days, male) 12.9

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The Human Protein Atlas

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