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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:40.0 nTPM
HPA:40.0 nTPM
GTEx:33.1 nTPM
FANTOM5:86.2 Scaled Tags Per Million
Pig:17.7 nTPM
Mouse:49.6 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007922
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.0
Sample id Sample description nTPM
Hippocampus
nTPM: 36.8
1898 Male, age 80, left hemisphere 38.8
2621 Female, age 67, right hemisphere 37.0
1911 Female, age 85, right hemisphere 36.8
1855 Male, age 76, left hemisphere 36.1
2148 Female, age 91, left hemisphere 36.0
2529 Female, age 94, left hemisphere 35.9
Dentate gyrus
nTPM: 37.3
2530 Female, age 94, left hemisphere 40.2
2010 Male, age 76, both hemispheres 38.3
2246 Female, age 85, both hemispheres 37.2
1927 Female, age 91, both hemispheres 36.6
2531 Female, age 67, both hemispheres 35.8
2528 Male, age 74, both hemispheres 35.7
Entorhinal gyrus
nTPM: 38.9
2764 Male, age 80, right hemisphere 44.6
2613 Female, age 94, left hemisphere 41.5
1787 Male, age 76, left hemisphere 38.6
1938 Female, age 85, left hemisphere 38.4
2686 Male, age 75, right hemisphere 36.2
2117 Female, age 91, right hemisphere 34.2
Hippocampus, CA1
nTPM: 39.0
2749 Male, age 80, left hemisphere 51.2
1873 Female, age 85, both hemispheres 39.8
2045 Male, age 76, both hemispheres 37.1
2527 Male, age 74, both hemispheres 34.2
2082 Female, age 91, right hemisphere 32.6
Hippocampus, CA2
nTPM: 37.0
1963 Male, age 80, left hemisphere 40.3
2249 Male, age 74, both hemispheres 38.5
1892 Male, age 76, both hemispheres 38.1
2437 Female, age 94, left hemisphere 36.4
1940 Female, age 85, left hemisphere 36.1
2113 Female, age 91, right hemisphere 32.6
Hippocampus, CA3
nTPM: 38.3
2137 Male, age 80, left hemisphere 46.9
2620 Female, age 94, left hemisphere 44.1
1867 Male, age 76, both hemispheres 37.9
1891 Female, age 85, both hemispheres 36.2
2861 Female, age 67, both hemispheres 32.6
2436 Male, age 74, both hemispheres 32.1
Parahippocampal cortex
nTPM: 36.4
1850 Male, age 80, both hemispheres 41.0
2693 Female, age 94, both hemispheres 40.3
1990 Female, age 91, right hemisphere 38.0
1933 Female, age 85, both hemispheres 37.3
2532 Female, age 72, left hemisphere 35.9
2692 Male, age 74, both hemispheres 35.4
2245 Female, age 91, both hemispheres 35.0
2018 Male, age 76, both hemispheres 34.9
2622 Female, age 67, right hemisphere 34.3
2250 Female, age 67, right hemisphere 32.2
Perirhinal gyrus
nTPM: 40.0
2848 Male, age 76, right hemisphere 41.2
1794 Male, age 80, right hemisphere 40.6
1841 Female, age 85, right hemisphere 40.4
1847 Female, age 91, left hemisphere 39.2
2521 Female, age 94, right hemisphere 38.6
Subiculum
nTPM: 38.7
1901 Male, age 80, both hemispheres 42.0
2042 Male, age 76, both hemispheres 41.2
1977 Female, age 85, both hemispheres 39.2
2438 Female, age 94, left hemisphere 39.1
2619 Male, age 74, both hemispheres 36.5
2729 Female, age 91, right hemisphere 34.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.1
Samples: 197

Max nTPM: 53.0
Min nTPM: 20.8
Std nTPM: 5.8
Median nTPM: 33.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 53.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 48.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 47.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 46.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 45.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 45.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 44.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 44.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 43.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 43.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 86.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 86.2
FF:10169-103B7 60 years, female 88.9
FF:10153-102I9 76 years, female 83.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 21.3
Min nTPM: 13.8
Sample A Female 21.3
Sample B Female 18.3
Sample C Male 17.4
Sample D Male 13.8
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 17.7
Min nTPM: 14.2
Sample A Female 17.7
Sample B Female 17.2
Sample C Male 16.1
Sample D Male 14.2
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 19.8
Min nTPM: 14.8
Sample A Female 19.8
Sample B Female 14.8
Sample C Male 15.5
Sample D Male 14.8
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 18.8
Min nTPM: 12.9
Sample A Female 17.6
Sample B Female 12.9
Sample C Male 18.8
Sample D Male 18.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.6
Samples: 4

Max nTPM: 52.5
Min nTPM: 45.2
Sample A Male 45.9
Sample B Male 46.8
Sample C Female 45.2
Sample D Female 52.5
Hippocampal formation
nTPM: 49.6
Samples: 4

Max nTPM: 54.7
Min nTPM: 46.9
Sample A Male 47.1
Sample B Male 49.8
Sample C Female 54.7
Sample D Female 46.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
69013708 Antisense, RP_050309_02_G12, Mouse strain C57BL/6J (56 days, male) 5.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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