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GPBP1L1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:28.3 nTPM
HPA:28.3 nTPM
GTEx:23.4 nTPM
FANTOM5:69.6 Scaled Tags Per Million
Pig:25.6 nTPM
Mouse:22.6 nTPM
Allen mouse:1.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 28.3
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 27.3
1870 Female, age 42, unknown 28.7
1833 Male, age 53, unknown 28.5
2411 Female, age 72, unknown 28.5
1830 Male, age 51, unknown 28.0
2019 Male, age 18, unknown 27.6
2666 Male, age 74, left hemisphere 27.2
2586 Male, age 75, left hemisphere 26.6
1827 Male, age 72, unknown 26.2
2828 Female, age 72, unknown 26.0
2219 Male, age 76, both hemispheres 25.4
Dorsal raphe nucleus
nTPM: 25.7
2750 Male, age 76, both hemispheres 27.7
1828 Male, age 53, unknown 26.5
2016 Female, age 72, unknown 25.7
2047 Male, age 72, unknown 24.2
2298 Female, age 72, unknown 24.1
Inferior colliculus
nTPM: 27.1
1848 Female, age 42, unknown 28.1
1890 Male, age 53, unknown 26.9
2849 Male, age 72, unknown 26.7
2097 Female, age 72, unknown 26.6
Median raphe nucleus
nTPM: 25.2
2220 Male, age 76, midline 25.2
Pedunculopontine tegmental nucleus
nTPM: 26.1
2334 Male, age 80, both hemispheres 27.0
2338 Male, age 61, both hemispheres 25.9
1921 Female, age 85, both hemispheres 25.4
Periaquaductal grey, anterior
nTPM: 26.6
2502 Female, age 75, unknown 28.9
1947 Male, age 18, unknown 26.8
1795 Male, age 51, unknown 24.2
Periaquaductal grey, dorsal
nTPM: 26.0
2464 Female, age 72, unknown 27.2
1840 Male, age 53, unknown 26.6
2850 Male, age 76, both hemispheres 25.6
1831 Male, age 72, unknown 24.8
Periaquaductal grey, lateral
nTPM: 24.6
2140 Male, age 76, both hemispheres 25.9
2053 Male, age 18, unknown 24.8
2272 Male, age 74, both hemispheres 23.2
Pretectal area
nTPM: 25.8
1815 Male, age 53, unknown 27.2
1817 Female, age 42, unknown 27.2
2316 Male, age 76, right hemisphere 26.2
2007 Male, age 72, unknown 26.1
2667 Female, age 75, unknown 25.9
1944 Female, age 72, unknown 25.8
2825 Male, age 18, unknown 25.8
2224 Female, age 72, unknown 25.0
1816 Male, age 51, unknown 24.9
2273 Male, age 74, both hemispheres 24.6
2407 Male, age 75, both hemispheres 24.6
Red nucleus
nTPM: 28.3
1821 Female, age 72, unknown 31.0
1865 Male, age 51, unknown 29.9
1954 Female, age 42, unknown 29.3
1904 Male, age 53, unknown 29.2
2227 Male, age 72, unknown 28.8
2769 Male, age 72, unknown 28.5
2503 Female, age 72, unknown 28.2
2588 Male, age 74, left hemisphere 28.0
2785 Male, age 18, unknown 27.7
2823 Male, age 76, right hemisphere 27.7
2725 Female, age 75, unknown 26.3
2584 Male, age 75, left hemisphere 25.4
Substantia nigra
nTPM: 27.2
2241 Male, age 72, unknown 29.1
1851 Male, age 51, unknown 28.3
2699 Male, age 18, unknown 27.9
2409 Female, age 72, unknown 27.8
2665 Male, age 74, both hemispheres 27.3
1916 Female, age 42, unknown 26.9
2583 Male, age 75, right hemisphere 26.6
1889 Female, age 72, unknown 26.5
2590 Female, age 75, unknown 26.0
1941 Male, age 53, unknown 25.2
Superior colliculus
nTPM: 26.5
1839 Male, age 51, unknown 27.8
1995 Male, age 72, unknown 27.8
1913 Female, age 42, unknown 27.7
1895 Male, age 76, right hemisphere 27.6
2587 Male, age 74, left hemisphere 27.1
2668 Female, age 75, unknown 27.1
2261 Male, age 18, unknown 25.4
2664 Male, age 75, both hemispheres 25.1
1796 Male, age 53, unknown 24.9
2087 Female, age 72, unknown 24.8
Ventral tegmental area
nTPM: 26.8
2410 Female, age 72, unknown 29.0
2218 Male, age 76, both hemispheres 27.4
2223 Female, age 72, unknown 27.0
1915 Female, age 42, unknown 26.3
1942 Male, age 51, unknown 25.7
2021 Male, age 53, unknown 25.6

MIDBRAIN - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 23.4
Samples: 139

Max nTPM: 39.4
Min nTPM: 12.2
Std nTPM: 4.4
Median nTPM: 22.9
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 39.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 37.2
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 37.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 34.7
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 32.9
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 32.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z 60-69 years, male 31.8
GTEX-XMD1-0011-R2B-SM-4AT5N 60-69 years, male 31.5
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 31.5
GTEX-11UD1-0011-R2b-SM-5BC6O 40-49 years, female 30.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ 70-79 years, male 30.5
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 69.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 69.6
FF:10158-103A5 76 years, female 69.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 25.6
Pig sample Sample description nTPM
Midbrain
nTPM: 25.5
Samples: 4

Max nTPM: 29.9
Min nTPM: 22.5
Sample A Female 29.9
Sample B Female 27.1
Sample C Male 22.5
Sample D Male 22.5
Periaqueductal gray
nTPM: 25.6
Samples: 3

Max nTPM: 27.0
Min nTPM: 23.7
Sample B Female 26.1
Sample C Male 27.0
Sample D Male 23.7
Substantia nigra
nTPM: 25.1
Samples: 4

Max nTPM: 28.7
Min nTPM: 22.3
Sample A Female 28.7
Sample B Female 22.8
Sample C Male 26.5
Sample D Male 22.3
Superior colliculi
nTPM: 23.6
Samples: 4

Max nTPM: 27.2
Min nTPM: 21.1
Sample A Female 27.2
Sample B Female 21.1
Sample C Male 21.5
Sample D Male 24.4

MIDBRAIN - Mouse RNA-seqi
Average nTPM 22.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 22.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 21.2
Sample A Male 21.2
Sample B Male 23.6
Sample C Female 22.7
Sample D Female 22.9

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.0
70445484 Antisense, RP_050614_03_H09, Mouse strain C57BL/6J (56 days, male) 1.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.