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UBE2J2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:25.0 nTPM
FANTOM5:34.8 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:30.7 nTPM
Allen mouse:1.8 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 23.0
2586 Male, age 75, left hemisphere 29.3
1830 Male, age 51, unknown 23.0
2019 Male, age 18, unknown 22.8
2411 Female, age 72, unknown 22.8
2666 Male, age 74, left hemisphere 22.4
2828 Female, age 72, unknown 22.4
1870 Female, age 42, unknown 22.3
1833 Male, age 53, unknown 22.1
1827 Male, age 72, unknown 21.9
2219 Male, age 76, both hemispheres 21.3
Dorsal raphe nucleus
nTPM: 21.1
2047 Male, age 72, unknown 21.4
1828 Male, age 53, unknown 21.3
2750 Male, age 76, both hemispheres 21.3
2298 Female, age 72, unknown 20.8
2016 Female, age 72, unknown 20.6
Inferior colliculus
nTPM: 21.3
1890 Male, age 53, unknown 22.6
1848 Female, age 42, unknown 21.5
2849 Male, age 72, unknown 21.1
2097 Female, age 72, unknown 20.0
Median raphe nucleus
nTPM: 20.2
2220 Male, age 76, midline 20.2
Pedunculopontine tegmental nucleus
nTPM: 21.1
1921 Female, age 85, both hemispheres 22.0
2334 Male, age 80, both hemispheres 21.8
2338 Male, age 61, both hemispheres 19.7
Periaquaductal grey, anterior
nTPM: 23.0
1947 Male, age 18, unknown 24.0
2502 Female, age 75, unknown 23.1
1795 Male, age 51, unknown 22.0
Periaquaductal grey, dorsal
nTPM: 20.1
1831 Male, age 72, unknown 21.0
2850 Male, age 76, both hemispheres 20.9
2464 Female, age 72, unknown 19.3
1840 Male, age 53, unknown 19.2
Periaquaductal grey, lateral
nTPM: 21.8
2140 Male, age 76, both hemispheres 22.8
2053 Male, age 18, unknown 21.3
2272 Male, age 74, both hemispheres 21.2
Pretectal area
nTPM: 22.9
2667 Female, age 75, unknown 24.6
2007 Male, age 72, unknown 24.4
2407 Male, age 75, both hemispheres 24.3
2316 Male, age 76, right hemisphere 24.1
1817 Female, age 42, unknown 23.4
1815 Male, age 53, unknown 23.1
1816 Male, age 51, unknown 23.0
1944 Female, age 72, unknown 22.8
2224 Female, age 72, unknown 21.0
2825 Male, age 18, unknown 20.7
2273 Male, age 74, both hemispheres 20.6
Red nucleus
nTPM: 22.8
2584 Male, age 75, left hemisphere 25.7
2785 Male, age 18, unknown 24.6
1904 Male, age 53, unknown 23.9
1821 Female, age 72, unknown 23.0
2227 Male, age 72, unknown 22.7
2588 Male, age 74, left hemisphere 22.6
2769 Male, age 72, unknown 22.6
1865 Male, age 51, unknown 22.5
2725 Female, age 75, unknown 22.0
1954 Female, age 42, unknown 21.9
2823 Male, age 76, right hemisphere 21.5
2503 Female, age 72, unknown 20.7
Substantia nigra
nTPM: 22.6
2409 Female, age 72, unknown 27.0
2583 Male, age 75, right hemisphere 24.1
1851 Male, age 51, unknown 22.9
1916 Female, age 42, unknown 22.4
2699 Male, age 18, unknown 22.1
1889 Female, age 72, unknown 22.0
1941 Male, age 53, unknown 21.7
2665 Male, age 74, both hemispheres 21.5
2241 Male, age 72, unknown 21.1
2590 Female, age 75, unknown 20.9
Superior colliculus
nTPM: 23.0
2664 Male, age 75, both hemispheres 24.0
2668 Female, age 75, unknown 23.7
2261 Male, age 18, unknown 23.6
1839 Male, age 51, unknown 23.3
1913 Female, age 42, unknown 23.2
1895 Male, age 76, right hemisphere 23.1
1995 Male, age 72, unknown 23.0
1796 Male, age 53, unknown 22.9
2087 Female, age 72, unknown 21.5
2587 Male, age 74, left hemisphere 21.4
Ventral tegmental area
nTPM: 21.8
2410 Female, age 72, unknown 23.3
1942 Male, age 51, unknown 22.1
2218 Male, age 76, both hemispheres 21.7
1915 Female, age 42, unknown 21.5
2021 Male, age 53, unknown 21.5
2223 Female, age 72, unknown 20.5

MIDBRAIN - GTEx RNA-seqi
Average nTPM 25.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 25.0
Samples: 139

Max nTPM: 39.0
Min nTPM: 14.3
Std nTPM: 4.3
Median nTPM: 24.7
GTEX-OXRO-0011-R2A-SM-3NB1W 60-69 years, female 39.0
GTEX-ZE9C-0011-R2a-SM-4WKGH 60-69 years, male 38.0
GTEX-13NYS-0011-R2b-SM-5MR4G 60-69 years, male 36.6
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 35.9
GTEX-1IKOH-0011-R2a-SM-CMKHO 60-69 years, female 34.4
GTEX-1GMR8-0011-R2a-SM-CE6RD 50-59 years, female 34.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 34.0
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 33.6
GTEX-11GS4-0011-R2a-SM-DO942 60-69 years, male 31.9
GTEX-12WSD-0011-R2a-SM-5LZWB 60-69 years, female 31.7
GTEX-12WSF-0011-R2a-SM-5DUVU 70-79 years, male 30.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 34.8
FF:10158-103A5 76 years, female 34.8

MIDBRAIN - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Midbrain
nTPM: 15.8
Samples: 4

Max nTPM: 20.1
Min nTPM: 12.9
Sample A Female 20.1
Sample B Female 12.9
Sample C Male 16.5
Sample D Male 13.8
Periaqueductal gray
nTPM: 12.9
Samples: 3

Max nTPM: 15.2
Min nTPM: 11.3
Sample B Female 12.2
Sample C Male 15.2
Sample D Male 11.3
Substantia nigra
nTPM: 15.4
Samples: 4

Max nTPM: 18.3
Min nTPM: 13.7
Sample A Female 18.3
Sample B Female 13.7
Sample C Male 15.2
Sample D Male 14.3
Superior colliculi
nTPM: 15.5
Samples: 4

Max nTPM: 17.0
Min nTPM: 13.4
Sample A Female 17.0
Sample B Female 16.7
Sample C Male 14.8
Sample D Male 13.4

MIDBRAIN - Mouse RNA-seqi
Average nTPM 30.7
Mouse sample Sample description nTPM
Midbrain
nTPM: 30.8
Samples: 4

Max nTPM: 33.2
Min nTPM: 28.7
Sample A Male 29.5
Sample B Male 33.2
Sample C Female 28.7
Sample D Female 31.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.8
77620443 Antisense, RP_070129_03_C09, Mouse strain C57BL/6J (56 days, male) 1.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.