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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:16.4 nTPM
HPA:16.4 nTPM
GTEx:19.5 nTPM
FANTOM5:32.0 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:21.4 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058265Antibody CAB046486
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.4
Sample id Sample description nTPM
Hippocampus
nTPM: 16.4
2529 Female, age 94, left hemisphere 18.3
2148 Female, age 91, left hemisphere 17.2
2621 Female, age 67, right hemisphere 16.4
1898 Male, age 80, left hemisphere 15.9
1911 Female, age 85, right hemisphere 15.4
1855 Male, age 76, left hemisphere 15.0
Dentate gyrus
nTPM: 15.1
2530 Female, age 94, left hemisphere 16.2
2246 Female, age 85, both hemispheres 16.1
2528 Male, age 74, both hemispheres 15.6
2531 Female, age 67, both hemispheres 15.2
2010 Male, age 76, both hemispheres 14.7
1927 Female, age 91, both hemispheres 12.9
Entorhinal gyrus
nTPM: 16.1
2117 Female, age 91, right hemisphere 17.4
1938 Female, age 85, left hemisphere 16.6
2764 Male, age 80, right hemisphere 16.2
2686 Male, age 75, right hemisphere 15.8
1787 Male, age 76, left hemisphere 15.6
2613 Female, age 94, left hemisphere 15.0
Hippocampus, CA1
nTPM: 15.3
2527 Male, age 74, both hemispheres 17.3
1873 Female, age 85, both hemispheres 15.5
2045 Male, age 76, both hemispheres 14.7
2082 Female, age 91, right hemisphere 14.5
2749 Male, age 80, left hemisphere 14.5
Hippocampus, CA2
nTPM: 15.4
1963 Male, age 80, left hemisphere 16.1
1940 Female, age 85, left hemisphere 15.7
2437 Female, age 94, left hemisphere 15.4
2249 Male, age 74, both hemispheres 15.3
2113 Female, age 91, right hemisphere 14.9
1892 Male, age 76, both hemispheres 14.8
Hippocampus, CA3
nTPM: 15.3
2620 Female, age 94, left hemisphere 16.9
2861 Female, age 67, both hemispheres 16.1
1891 Female, age 85, both hemispheres 16.0
2436 Male, age 74, both hemispheres 14.9
2137 Male, age 80, left hemisphere 14.1
1867 Male, age 76, both hemispheres 13.7
Parahippocampal cortex
nTPM: 15.9
2692 Male, age 74, both hemispheres 18.4
2245 Female, age 91, both hemispheres 16.9
2622 Female, age 67, right hemisphere 16.9
2532 Female, age 72, left hemisphere 16.2
1850 Male, age 80, both hemispheres 16.1
1990 Female, age 91, right hemisphere 15.2
2250 Female, age 67, right hemisphere 15.0
2693 Female, age 94, both hemispheres 15.0
2018 Male, age 76, both hemispheres 14.7
1933 Female, age 85, both hemispheres 14.6
Perirhinal gyrus
nTPM: 15.5
1794 Male, age 80, right hemisphere 17.0
1847 Female, age 91, left hemisphere 15.8
1841 Female, age 85, right hemisphere 15.3
2848 Male, age 76, right hemisphere 15.0
2521 Female, age 94, right hemisphere 14.6
Subiculum
nTPM: 16.4
2619 Male, age 74, both hemispheres 17.9
2438 Female, age 94, left hemisphere 16.7
1901 Male, age 80, both hemispheres 16.6
2729 Female, age 91, right hemisphere 16.4
1977 Female, age 85, both hemispheres 15.7
2042 Male, age 76, both hemispheres 15.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.5
Samples: 197

Max nTPM: 33.9
Min nTPM: 12.9
Std nTPM: 3.1
Median nTPM: 19.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 33.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 30.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 27.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 26.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 25.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 25.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 25.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 24.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.0
FF:10153-102I9 76 years, female 43.2
FF:10169-103B7 60 years, female 20.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 18.5
Min nTPM: 14.1
Sample A Female 18.2
Sample B Female 16.0
Sample C Male 18.5
Sample D Male 14.1
Entorhinal cortex
nTPM: 17.5
Samples: 4

Max nTPM: 19.5
Min nTPM: 14.9
Sample A Female 19.5
Sample B Female 14.9
Sample C Male 18.3
Sample D Male 17.2
Subiculum
nTPM: 19.0
Samples: 4

Max nTPM: 21.9
Min nTPM: 16.8
Sample A Female 21.9
Sample B Female 17.4
Sample C Male 19.8
Sample D Male 16.8
Ventral hippocampus
nTPM: 18.3
Samples: 4

Max nTPM: 25.0
Min nTPM: 14.9
Sample A Female 16.9
Sample B Female 14.9
Sample C Male 25.0
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.4
Samples: 4

Max nTPM: 23.2
Min nTPM: 19.6
Sample A Male 21.0
Sample B Male 21.8
Sample C Female 19.6
Sample D Female 23.2
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 20.8
Min nTPM: 17.0
Sample A Male 17.0
Sample B Male 20.1
Sample C Female 20.8
Sample D Female 19.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
70724673 Antisense, RP_050705_02_D10, Mouse strain C57BL/6J (56 days, male) 3.1

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