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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:10.9 nTPM
HPA:10.9 nTPM
GTEx:12.9 nTPM
FANTOM5:56.7 Scaled Tags Per Million
Pig:19.7 nTPM
Mouse:41.6 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036332
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.2
1898 Male, age 80, left hemisphere 11.6
2621 Female, age 67, right hemisphere 9.9
1855 Male, age 76, left hemisphere 9.2
2148 Female, age 91, left hemisphere 8.9
2529 Female, age 94, left hemisphere 8.0
1911 Female, age 85, right hemisphere 7.4
Dentate gyrus
nTPM: 9.5
2530 Female, age 94, left hemisphere 10.4
1927 Female, age 91, both hemispheres 10.1
2531 Female, age 67, both hemispheres 9.9
2010 Male, age 76, both hemispheres 9.2
2246 Female, age 85, both hemispheres 9.0
2528 Male, age 74, both hemispheres 8.8
Entorhinal gyrus
nTPM: 10.1
2613 Female, age 94, left hemisphere 11.6
1787 Male, age 76, left hemisphere 10.1
2764 Male, age 80, right hemisphere 10.1
1938 Female, age 85, left hemisphere 10.0
2686 Male, age 75, right hemisphere 9.5
2117 Female, age 91, right hemisphere 9.2
Hippocampus, CA1
nTPM: 10.4
2749 Male, age 80, left hemisphere 13.9
1873 Female, age 85, both hemispheres 10.5
2527 Male, age 74, both hemispheres 10.3
2045 Male, age 76, both hemispheres 9.8
2082 Female, age 91, right hemisphere 7.4
Hippocampus, CA2
nTPM: 9.5
1892 Male, age 76, both hemispheres 12.6
1963 Male, age 80, left hemisphere 10.4
2437 Female, age 94, left hemisphere 10.2
1940 Female, age 85, left hemisphere 8.6
2249 Male, age 74, both hemispheres 8.1
2113 Female, age 91, right hemisphere 6.9
Hippocampus, CA3
nTPM: 10.2
2137 Male, age 80, left hemisphere 11.3
1867 Male, age 76, both hemispheres 10.8
2620 Female, age 94, left hemisphere 10.7
2861 Female, age 67, both hemispheres 10.0
2436 Male, age 74, both hemispheres 9.8
1891 Female, age 85, both hemispheres 8.6
Parahippocampal cortex
nTPM: 9.3
1990 Female, age 91, right hemisphere 10.8
1850 Male, age 80, both hemispheres 10.2
2245 Female, age 91, both hemispheres 10.2
2250 Female, age 67, right hemisphere 9.8
2532 Female, age 72, left hemisphere 9.0
2693 Female, age 94, both hemispheres 9.0
1933 Female, age 85, both hemispheres 8.9
2692 Male, age 74, both hemispheres 8.9
2018 Male, age 76, both hemispheres 8.7
2622 Female, age 67, right hemisphere 7.6
Perirhinal gyrus
nTPM: 10.9
1847 Female, age 91, left hemisphere 12.6
1794 Male, age 80, right hemisphere 11.6
2521 Female, age 94, right hemisphere 10.3
2848 Male, age 76, right hemisphere 10.2
1841 Female, age 85, right hemisphere 9.9
Subiculum
nTPM: 8.6
2619 Male, age 74, both hemispheres 10.7
1901 Male, age 80, both hemispheres 9.9
1977 Female, age 85, both hemispheres 9.9
2042 Male, age 76, both hemispheres 7.3
2438 Female, age 94, left hemisphere 6.9
2729 Female, age 91, right hemisphere 6.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 25.9
Min nTPM: 3.0
Std nTPM: 4.0
Median nTPM: 12.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 25.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 24.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 24.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 23.6
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 22.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 22.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 21.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 21.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 21.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 20.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 20.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.7
FF:10169-103B7 60 years, female 61.7
FF:10153-102I9 76 years, female 51.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 23.9
Min nTPM: 16.2
Sample A Female 23.9
Sample B Female 19.6
Sample C Male 19.0
Sample D Male 16.2
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 20.3
Min nTPM: 14.9
Sample A Female 19.5
Sample B Female 20.3
Sample C Male 17.4
Sample D Male 14.9
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.3
Sample A Female 21.7
Sample B Female 15.9
Sample C Male 18.4
Sample D Male 15.3
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 25.0
Min nTPM: 15.0
Sample A Female 20.9
Sample B Female 15.0
Sample C Male 25.0
Sample D Male 18.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.6
Samples: 4

Max nTPM: 44.3
Min nTPM: 37.2
Sample A Male 37.2
Sample B Male 41.6
Sample C Female 43.2
Sample D Female 44.3
Hippocampal formation
nTPM: 41.7
Samples: 4

Max nTPM: 43.0
Min nTPM: 40.8
Sample A Male 43.0
Sample B Male 41.6
Sample C Female 41.2
Sample D Female 40.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
68545656 Antisense, RP_050120_01_C09, Mouse strain C57BL/6J (56 days, male) 5.1

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