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JOSD2
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:27.3 nTPM
HPA:27.3 nTPM
GTEx:54.0 nTPM
FANTOM5:18.1 Scaled Tags Per Million
Mouse:33.0 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.3
Sample id Sample description nTPM
Hippocampus
nTPM: 25.0
1898 Male, age 80, left hemisphere 28.3
1911 Female, age 85, right hemisphere 26.3
2529 Female, age 94, left hemisphere 25.4
1855 Male, age 76, left hemisphere 24.0
2148 Female, age 91, left hemisphere 23.5
2621 Female, age 67, right hemisphere 22.6
Dentate gyrus
nTPM: 24.9
2530 Female, age 94, left hemisphere 28.6
2528 Male, age 74, both hemispheres 27.5
2010 Male, age 76, both hemispheres 27.1
1927 Female, age 91, both hemispheres 23.1
2531 Female, age 67, both hemispheres 21.8
2246 Female, age 85, both hemispheres 21.0
Entorhinal gyrus
nTPM: 27.3
2117 Female, age 91, right hemisphere 32.3
2764 Male, age 80, right hemisphere 30.2
2613 Female, age 94, left hemisphere 26.8
1938 Female, age 85, left hemisphere 26.0
1787 Male, age 76, left hemisphere 24.7
2686 Male, age 75, right hemisphere 24.0
Hippocampus, CA1
nTPM: 24.2
2749 Male, age 80, left hemisphere 27.2
1873 Female, age 85, both hemispheres 24.4
2082 Female, age 91, right hemisphere 24.3
2527 Male, age 74, both hemispheres 24.3
2045 Male, age 76, both hemispheres 20.6
Hippocampus, CA2
nTPM: 26.4
1963 Male, age 80, left hemisphere 28.8
2249 Male, age 74, both hemispheres 27.4
1892 Male, age 76, both hemispheres 26.3
2437 Female, age 94, left hemisphere 26.0
2113 Female, age 91, right hemisphere 25.1
1940 Female, age 85, left hemisphere 24.6
Hippocampus, CA3
nTPM: 23.6
1867 Male, age 76, both hemispheres 25.6
1891 Female, age 85, both hemispheres 24.2
2620 Female, age 94, left hemisphere 24.2
2861 Female, age 67, both hemispheres 23.2
2137 Male, age 80, left hemisphere 22.7
2436 Male, age 74, both hemispheres 21.5
Parahippocampal cortex
nTPM: 23.0
1990 Female, age 91, right hemisphere 25.7
2692 Male, age 74, both hemispheres 25.2
1933 Female, age 85, both hemispheres 24.1
2245 Female, age 91, both hemispheres 24.1
2532 Female, age 72, left hemisphere 23.3
1850 Male, age 80, both hemispheres 23.0
2018 Male, age 76, both hemispheres 22.4
2622 Female, age 67, right hemisphere 21.7
2250 Female, age 67, right hemisphere 20.9
2693 Female, age 94, both hemispheres 19.8
Perirhinal gyrus
nTPM: 22.5
1794 Male, age 80, right hemisphere 24.6
1841 Female, age 85, right hemisphere 22.7
1847 Female, age 91, left hemisphere 22.5
2848 Male, age 76, right hemisphere 21.4
2521 Female, age 94, right hemisphere 21.2
Subiculum
nTPM: 25.6
2042 Male, age 76, both hemispheres 28.3
1977 Female, age 85, both hemispheres 27.0
2619 Male, age 74, both hemispheres 26.5
1901 Male, age 80, both hemispheres 26.2
2729 Female, age 91, right hemisphere 23.4
2438 Female, age 94, left hemisphere 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.0
Samples: 197

Max nTPM: 127.0
Min nTPM: 15.8
Std nTPM: 16.4
Median nTPM: 52.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 127.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 105.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 93.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 89.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 88.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 85.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 83.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 83.4
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 82.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 81.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 81.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.1
FF:10169-103B7 60 years, female 19.8
FF:10153-102I9 76 years, female 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.9
Samples: 4

Max nTPM: 32.5
Min nTPM: 18.6
Sample A Male 32.5
Sample B Male 30.3
Sample C Female 26.2
Sample D Female 18.6
Hippocampal formation
nTPM: 33.0
Samples: 4

Max nTPM: 44.7
Min nTPM: 23.8
Sample A Male 23.8
Sample B Male 25.5
Sample C Female 38.1
Sample D Female 44.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
69015817 Antisense, RP_050315_01_G05, Mouse strain C57BL/6J (56 days, male) 4.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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