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SNRNP25
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:81.7 nTPM
HPA:81.7 nTPM
GTEx:72.9 nTPM
FANTOM5:35.3 Scaled Tags Per Million
Pig:50.4 nTPM
Mouse:34.6 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041183Antibody HPA044248
Glial cells MediumLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.7
Sample id Sample description nTPM
Hippocampus
nTPM: 78.0
1898 Male, age 80, left hemisphere 85.1
2529 Female, age 94, left hemisphere 79.2
2148 Female, age 91, left hemisphere 77.9
2621 Female, age 67, right hemisphere 77.6
1855 Male, age 76, left hemisphere 75.2
1911 Female, age 85, right hemisphere 73.1
Dentate gyrus
nTPM: 77.3
2530 Female, age 94, left hemisphere 80.1
1927 Female, age 91, both hemispheres 79.1
2528 Male, age 74, both hemispheres 77.8
2531 Female, age 67, both hemispheres 76.4
2010 Male, age 76, both hemispheres 75.5
2246 Female, age 85, both hemispheres 74.9
Entorhinal gyrus
nTPM: 80.4
2613 Female, age 94, left hemisphere 82.8
1938 Female, age 85, left hemisphere 82.2
2764 Male, age 80, right hemisphere 82.2
2686 Male, age 75, right hemisphere 80.4
1787 Male, age 76, left hemisphere 79.2
2117 Female, age 91, right hemisphere 75.7
Hippocampus, CA1
nTPM: 78.8
2749 Male, age 80, left hemisphere 87.8
2527 Male, age 74, both hemispheres 80.0
2082 Female, age 91, right hemisphere 76.3
1873 Female, age 85, both hemispheres 76.1
2045 Male, age 76, both hemispheres 73.8
Hippocampus, CA2
nTPM: 78.2
1963 Male, age 80, left hemisphere 82.1
1892 Male, age 76, both hemispheres 81.3
2437 Female, age 94, left hemisphere 78.2
2249 Male, age 74, both hemispheres 77.1
2113 Female, age 91, right hemisphere 75.9
1940 Female, age 85, left hemisphere 74.5
Hippocampus, CA3
nTPM: 78.3
2137 Male, age 80, left hemisphere 81.6
2861 Female, age 67, both hemispheres 79.9
1867 Male, age 76, both hemispheres 79.3
2436 Male, age 74, both hemispheres 77.9
1891 Female, age 85, both hemispheres 76.5
2620 Female, age 94, left hemisphere 74.4
Parahippocampal cortex
nTPM: 79.0
1850 Male, age 80, both hemispheres 83.3
1990 Female, age 91, right hemisphere 81.8
2692 Male, age 74, both hemispheres 80.6
2250 Female, age 67, right hemisphere 79.2
2622 Female, age 67, right hemisphere 79.2
1933 Female, age 85, both hemispheres 79.0
2245 Female, age 91, both hemispheres 78.4
2693 Female, age 94, both hemispheres 77.2
2532 Female, age 72, left hemisphere 76.0
2018 Male, age 76, both hemispheres 75.4
Perirhinal gyrus
nTPM: 81.7
1847 Female, age 91, left hemisphere 88.3
1794 Male, age 80, right hemisphere 84.3
1841 Female, age 85, right hemisphere 80.0
2521 Female, age 94, right hemisphere 79.4
2848 Male, age 76, right hemisphere 76.5
Subiculum
nTPM: 78.1
1901 Male, age 80, both hemispheres 81.8
2619 Male, age 74, both hemispheres 81.0
1977 Female, age 85, both hemispheres 78.9
2438 Female, age 94, left hemisphere 77.6
2729 Female, age 91, right hemisphere 75.7
2042 Male, age 76, both hemispheres 73.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.9
Samples: 197

Max nTPM: 199.3
Min nTPM: 22.2
Std nTPM: 30.0
Median nTPM: 65.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 199.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 193.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 169.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 165.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 155.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 145.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 141.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 137.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 132.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 129.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 127.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.3
FF:10169-103B7 60 years, female 43.9
FF:10153-102I9 76 years, female 26.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.7
Samples: 4

Max nTPM: 61.4
Min nTPM: 26.9
Sample A Female 61.4
Sample B Female 40.1
Sample C Male 58.3
Sample D Male 26.9
Entorhinal cortex
nTPM: 50.4
Samples: 4

Max nTPM: 67.2
Min nTPM: 36.1
Sample A Female 42.5
Sample B Female 67.2
Sample C Male 55.8
Sample D Male 36.1
Subiculum
nTPM: 38.9
Samples: 4

Max nTPM: 57.3
Min nTPM: 30.8
Sample A Female 57.3
Sample B Female 34.7
Sample C Male 30.8
Sample D Male 32.7
Ventral hippocampus
nTPM: 38.1
Samples: 4

Max nTPM: 45.2
Min nTPM: 31.7
Sample A Female 35.5
Sample B Female 31.7
Sample C Male 45.2
Sample D Male 39.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 37.7
Min nTPM: 30.1
Sample A Male 30.1
Sample B Male 33.8
Sample C Female 37.7
Sample D Female 33.7
Hippocampal formation
nTPM: 34.6
Samples: 4

Max nTPM: 38.9
Min nTPM: 29.3
Sample A Male 38.9
Sample B Male 29.3
Sample C Female 33.6
Sample D Female 36.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
68544997 Antisense, RP_050118_02_G02, Mouse strain C57BL/6J (56 days, male) 3.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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