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ARPC5
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:20.0 nTPM
HPA:20.0 nTPM
GTEx:26.5 nTPM
FANTOM5:107.9 Scaled Tags Per Million
Pig:46.6 nTPM
Mouse:212.7 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022013
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.0
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
1898 Male, age 80, left hemisphere 22.1
1911 Female, age 85, right hemisphere 19.2
2529 Female, age 94, left hemisphere 18.2
2621 Female, age 67, right hemisphere 16.9
1855 Male, age 76, left hemisphere 16.4
2148 Female, age 91, left hemisphere 14.8
Dentate gyrus
nTPM: 17.2
2530 Female, age 94, left hemisphere 24.0
2010 Male, age 76, both hemispheres 23.2
2246 Female, age 85, both hemispheres 15.6
1927 Female, age 91, both hemispheres 15.3
2531 Female, age 67, both hemispheres 14.1
2528 Male, age 74, both hemispheres 11.1
Entorhinal gyrus
nTPM: 15.9
2117 Female, age 91, right hemisphere 20.9
1938 Female, age 85, left hemisphere 17.8
2764 Male, age 80, right hemisphere 17.1
1787 Male, age 76, left hemisphere 14.2
2613 Female, age 94, left hemisphere 13.8
2686 Male, age 75, right hemisphere 11.7
Hippocampus, CA1
nTPM: 20.0
2749 Male, age 80, left hemisphere 32.7
1873 Female, age 85, both hemispheres 20.5
2045 Male, age 76, both hemispheres 16.7
2527 Male, age 74, both hemispheres 16.4
2082 Female, age 91, right hemisphere 13.6
Hippocampus, CA2
nTPM: 17.5
1963 Male, age 80, left hemisphere 21.2
1892 Male, age 76, both hemispheres 20.2
1940 Female, age 85, left hemisphere 19.2
2437 Female, age 94, left hemisphere 16.1
2249 Male, age 74, both hemispheres 14.3
2113 Female, age 91, right hemisphere 14.1
Hippocampus, CA3
nTPM: 17.8
2137 Male, age 80, left hemisphere 29.2
1867 Male, age 76, both hemispheres 23.7
1891 Female, age 85, both hemispheres 19.3
2861 Female, age 67, both hemispheres 11.6
2436 Male, age 74, both hemispheres 11.4
2620 Female, age 94, left hemisphere 11.4
Parahippocampal cortex
nTPM: 15.2
2245 Female, age 91, both hemispheres 22.3
2018 Male, age 76, both hemispheres 21.4
1933 Female, age 85, both hemispheres 16.2
1990 Female, age 91, right hemisphere 15.9
1850 Male, age 80, both hemispheres 15.4
2532 Female, age 72, left hemisphere 15.4
2250 Female, age 67, right hemisphere 15.3
2693 Female, age 94, both hemispheres 10.7
2692 Male, age 74, both hemispheres 10.1
2622 Female, age 67, right hemisphere 9.0
Perirhinal gyrus
nTPM: 14.9
1847 Female, age 91, left hemisphere 16.2
1841 Female, age 85, right hemisphere 16.1
2521 Female, age 94, right hemisphere 15.5
1794 Male, age 80, right hemisphere 15.0
2848 Male, age 76, right hemisphere 11.8
Subiculum
nTPM: 18.4
1901 Male, age 80, both hemispheres 27.1
2042 Male, age 76, both hemispheres 23.5
1977 Female, age 85, both hemispheres 20.1
2438 Female, age 94, left hemisphere 15.4
2619 Male, age 74, both hemispheres 12.5
2729 Female, age 91, right hemisphere 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 26.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.5
Samples: 197

Max nTPM: 63.0
Min nTPM: 5.9
Std nTPM: 10.2
Median nTPM: 26.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 63.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 56.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 52.2
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 51.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 50.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 49.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 48.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 47.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 47.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 46.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 45.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 107.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.9
FF:10169-103B7 60 years, female 121.3
FF:10153-102I9 76 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 61.3
Min nTPM: 35.1
Sample A Female 61.3
Sample B Female 49.4
Sample C Male 35.1
Sample D Male 40.6
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 31.7
Min nTPM: 21.6
Sample A Female 25.1
Sample B Female 31.7
Sample C Male 28.7
Sample D Male 21.6
Subiculum
nTPM: 30.2
Samples: 4

Max nTPM: 38.9
Min nTPM: 24.7
Sample A Female 38.9
Sample B Female 30.3
Sample C Male 24.7
Sample D Male 26.9
Ventral hippocampus
nTPM: 32.6
Samples: 4

Max nTPM: 52.8
Min nTPM: 24.6
Sample A Female 24.6
Sample B Female 26.7
Sample C Male 26.1
Sample D Male 52.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 212.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.3
Samples: 4

Max nTPM: 124.5
Min nTPM: 95.4
Sample A Male 95.4
Sample B Male 97.4
Sample C Female 124.5
Sample D Female 103.9
Hippocampal formation
nTPM: 212.7
Samples: 4

Max nTPM: 246.7
Min nTPM: 186.7
Sample A Male 210.8
Sample B Male 206.7
Sample C Female 246.7
Sample D Female 186.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
69526898 Antisense, RP_050421_01_H02, Mouse strain C57BL/6J (56 days, male) 6.3

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