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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:152.6 nTPM
HPA:152.6 nTPM
GTEx:122.2 nTPM
FANTOM5:106.2 Scaled Tags Per Million
Pig:71.7 nTPM
Mouse:59.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 152.6
Sample id Sample description nTPM
Hippocampus
nTPM: 152.6
2621 Female, age 67, right hemisphere 156.8
1898 Male, age 80, left hemisphere 155.4
1855 Male, age 76, left hemisphere 154.3
1911 Female, age 85, right hemisphere 150.7
2529 Female, age 94, left hemisphere 150.1
2148 Female, age 91, left hemisphere 148.5
Dentate gyrus
nTPM: 151.1
2530 Female, age 94, left hemisphere 153.8
2246 Female, age 85, both hemispheres 152.7
2528 Male, age 74, both hemispheres 152.0
1927 Female, age 91, both hemispheres 150.9
2010 Male, age 76, both hemispheres 150.0
2531 Female, age 67, both hemispheres 147.0
Entorhinal gyrus
nTPM: 147.1
2117 Female, age 91, right hemisphere 151.1
1938 Female, age 85, left hemisphere 149.2
1787 Male, age 76, left hemisphere 147.6
2764 Male, age 80, right hemisphere 147.0
2686 Male, age 75, right hemisphere 145.9
2613 Female, age 94, left hemisphere 142.1
Hippocampus, CA1
nTPM: 150.9
2527 Male, age 74, both hemispheres 156.1
2749 Male, age 80, left hemisphere 151.4
2045 Male, age 76, both hemispheres 151.1
2082 Female, age 91, right hemisphere 149.5
1873 Female, age 85, both hemispheres 146.4
Hippocampus, CA2
nTPM: 150.0
2249 Male, age 74, both hemispheres 157.3
1963 Male, age 80, left hemisphere 151.1
1892 Male, age 76, both hemispheres 148.9
2437 Female, age 94, left hemisphere 148.3
1940 Female, age 85, left hemisphere 147.9
2113 Female, age 91, right hemisphere 146.8
Hippocampus, CA3
nTPM: 149.8
2436 Male, age 74, both hemispheres 156.8
1867 Male, age 76, both hemispheres 149.3
1891 Female, age 85, both hemispheres 149.1
2137 Male, age 80, left hemisphere 148.9
2861 Female, age 67, both hemispheres 148.2
2620 Female, age 94, left hemisphere 146.5
Parahippocampal cortex
nTPM: 149.5
2018 Male, age 76, both hemispheres 152.0
1933 Female, age 85, both hemispheres 151.3
2692 Male, age 74, both hemispheres 151.2
2245 Female, age 91, both hemispheres 150.6
2250 Female, age 67, right hemisphere 150.6
2532 Female, age 72, left hemisphere 149.5
1990 Female, age 91, right hemisphere 149.3
2693 Female, age 94, both hemispheres 147.9
1850 Male, age 80, both hemispheres 146.5
2622 Female, age 67, right hemisphere 146.2
Perirhinal gyrus
nTPM: 147.7
1841 Female, age 85, right hemisphere 149.3
1847 Female, age 91, left hemisphere 147.7
1794 Male, age 80, right hemisphere 147.5
2521 Female, age 94, right hemisphere 147.4
2848 Male, age 76, right hemisphere 146.3
Subiculum
nTPM: 151.4
2619 Male, age 74, both hemispheres 155.3
2042 Male, age 76, both hemispheres 155.1
1901 Male, age 80, both hemispheres 154.4
1977 Female, age 85, both hemispheres 148.3
2729 Female, age 91, right hemisphere 147.8
2438 Female, age 94, left hemisphere 147.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 122.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 122.2
Samples: 197

Max nTPM: 252.3
Min nTPM: 56.1
Std nTPM: 28.7
Median nTPM: 122.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 252.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 226.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 192.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 186.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 184.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 183.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 174.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 170.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 165.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 162.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 161.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.2
FF:10169-103B7 60 years, female 123.4
FF:10153-102I9 76 years, female 89.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.7
Samples: 4

Max nTPM: 87.7
Min nTPM: 58.4
Sample A Female 87.7
Sample B Female 64.2
Sample C Male 76.5
Sample D Male 58.4
Entorhinal cortex
nTPM: 52.8
Samples: 4

Max nTPM: 58.9
Min nTPM: 43.7
Sample A Female 53.6
Sample B Female 54.9
Sample C Male 58.9
Sample D Male 43.7
Subiculum
nTPM: 59.8
Samples: 4

Max nTPM: 69.5
Min nTPM: 49.4
Sample A Female 69.5
Sample B Female 58.5
Sample C Male 49.4
Sample D Male 61.6
Ventral hippocampus
nTPM: 64.6
Samples: 4

Max nTPM: 81.6
Min nTPM: 46.7
Sample A Female 61.4
Sample B Female 46.7
Sample C Male 81.6
Sample D Male 68.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.5
Samples: 4

Max nTPM: 59.7
Min nTPM: 52.7
Sample A Male 52.7
Sample B Male 59.7
Sample C Female 56.5
Sample D Female 53.1
Hippocampal formation
nTPM: 59.8
Samples: 4

Max nTPM: 64.1
Min nTPM: 54.4
Sample A Male 59.4
Sample B Male 54.4
Sample C Female 61.2
Sample D Female 64.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
67767459 Antisense, RP_040916_02_A09, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

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