ABOUTMENU
HELP
NEWS
AZI2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:16.2 nTPM
HPA:16.2 nTPM
GTEx:13.5 nTPM
FANTOM5:46.4 Scaled Tags Per Million
Pig:12.3 nTPM
Mouse:40.9 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035258
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 16.2
Sample id Sample description nTPM
Hippocampus
nTPM: 15.0
1911 Female, age 85, right hemisphere 17.1
2529 Female, age 94, left hemisphere 15.7
2621 Female, age 67, right hemisphere 14.9
1855 Male, age 76, left hemisphere 14.5
1898 Male, age 80, left hemisphere 14.4
2148 Female, age 91, left hemisphere 13.7
Dentate gyrus
nTPM: 14.5
1927 Female, age 91, both hemispheres 15.4
2010 Male, age 76, both hemispheres 15.3
2246 Female, age 85, both hemispheres 14.9
2530 Female, age 94, left hemisphere 14.2
2528 Male, age 74, both hemispheres 13.8
2531 Female, age 67, both hemispheres 13.2
Entorhinal gyrus
nTPM: 15.2
2613 Female, age 94, left hemisphere 16.0
1938 Female, age 85, left hemisphere 15.8
1787 Male, age 76, left hemisphere 15.6
2764 Male, age 80, right hemisphere 15.1
2117 Female, age 91, right hemisphere 14.8
2686 Male, age 75, right hemisphere 14.1
Hippocampus, CA1
nTPM: 16.2
2749 Male, age 80, left hemisphere 21.4
2527 Male, age 74, both hemispheres 16.6
1873 Female, age 85, both hemispheres 14.9
2082 Female, age 91, right hemisphere 14.7
2045 Male, age 76, both hemispheres 13.3
Hippocampus, CA2
nTPM: 15.4
1892 Male, age 76, both hemispheres 16.0
2249 Male, age 74, both hemispheres 15.7
1940 Female, age 85, left hemisphere 15.5
2113 Female, age 91, right hemisphere 15.3
2437 Female, age 94, left hemisphere 15.3
1963 Male, age 80, left hemisphere 14.7
Hippocampus, CA3
nTPM: 15.8
2137 Male, age 80, left hemisphere 19.6
1867 Male, age 76, both hemispheres 17.1
2436 Male, age 74, both hemispheres 16.1
1891 Female, age 85, both hemispheres 15.5
2620 Female, age 94, left hemisphere 13.4
2861 Female, age 67, both hemispheres 12.9
Parahippocampal cortex
nTPM: 15.9
1990 Female, age 91, right hemisphere 17.4
2245 Female, age 91, both hemispheres 16.7
1933 Female, age 85, both hemispheres 16.6
1850 Male, age 80, both hemispheres 16.3
2693 Female, age 94, both hemispheres 16.1
2250 Female, age 67, right hemisphere 15.7
2018 Male, age 76, both hemispheres 15.5
2622 Female, age 67, right hemisphere 15.3
2692 Male, age 74, both hemispheres 14.7
2532 Female, age 72, left hemisphere 14.5
Perirhinal gyrus
nTPM: 15.9
1847 Female, age 91, left hemisphere 17.6
1841 Female, age 85, right hemisphere 16.5
2848 Male, age 76, right hemisphere 15.7
1794 Male, age 80, right hemisphere 15.5
2521 Female, age 94, right hemisphere 14.2
Subiculum
nTPM: 15.5
1901 Male, age 80, both hemispheres 16.6
1977 Female, age 85, both hemispheres 16.6
2042 Male, age 76, both hemispheres 16.0
2619 Male, age 74, both hemispheres 15.6
2438 Female, age 94, left hemisphere 14.4
2729 Female, age 91, right hemisphere 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 25.8
Min nTPM: 5.2
Std nTPM: 4.2
Median nTPM: 12.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 25.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 25.8
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 25.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 25.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 24.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 24.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 23.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 23.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 23.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 22.9
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 22.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.4
FF:10169-103B7 60 years, female 48.1
FF:10153-102I9 76 years, female 44.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 13.9
Min nTPM: 10.7
Sample A Female 13.9
Sample B Female 12.0
Sample C Male 12.4
Sample D Male 10.7
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.9
Sample A Female 12.2
Sample B Female 13.2
Sample C Male 11.1
Sample D Male 10.9
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 13.6
Min nTPM: 9.4
Sample A Female 13.6
Sample B Female 9.4
Sample C Male 10.6
Sample D Male 9.9
Ventral hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 12.3
Min nTPM: 8.6
Sample A Female 11.3
Sample B Female 8.6
Sample C Male 11.5
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.4
Samples: 4

Max nTPM: 42.0
Min nTPM: 35.6
Sample A Male 35.6
Sample B Male 42.0
Sample C Female 38.3
Sample D Female 41.7
Hippocampal formation
nTPM: 41.0
Samples: 4

Max nTPM: 43.7
Min nTPM: 37.5
Sample A Male 43.7
Sample B Male 40.6
Sample C Female 37.5
Sample D Female 42.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
512987 Antisense, RP_040809_02_F05, Mouse strain C57BL/6J (56 days, male) 24.1
81599640 Antisense, RP_071212_04_F02, Mouse strain C57BL/6J (56 days, male) 4.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.