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CD200R1
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.4 nTPM
HPA:0.4 nTPM
GTEx:0.3 nTPM
FANTOM5:0.5 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 0.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.3
1857 Female, age 85, left hemisphere 0.5
1781 Male, age 74, unknown 0.3
1854 Male, age 80, left hemisphere 0.3
2481 Female, age 94, left hemisphere 0.3
2289 Male, age 61, right hemisphere 0.2
2290 Female, age 72, unknown 0.2
2846 Female, age 79, unknown 0.2
2288 Male, age 75, left hemisphere 0.1
Claustrum
nTPM: 0.2
2392 Female, age 94, both hemispheres 0.3
2196 Female, age 79, unknown 0.2
2284 Female, age 91, both hemispheres 0.2
2491 Male, age 75, both hemispheres 0.2
2568 Male, age 61, both hemispheres 0.2
2645 Female, age 72, unknown 0.2
1956 Male, age 74, unknown 0.1
2198 Male, age 80, both hemispheres 0.1
2292 Female, age 85, both hemispheres 0.1
Globus pallidus, externus
nTPM: 0.1
2395 Male, age 75, both hemispheres 0.2
1996 Male, age 80, right hemisphere 0.1
2646 Male, age 61, right hemisphere 0.1
2772 Female, age 79, unknown 0.1
2567 Female, age 72, unknown 0.0
Globus pallidus, internus
nTPM: 0.1
1818 Male, age 74, unknown 0.2
2037 Male, age 80, right hemisphere 0.2
2483 Female, age 94, right hemisphere 0.2
2111 Female, age 85, right hemisphere 0.1
2287 Male, age 75, right hemisphere 0.1
2566 Female, age 72, unknown 0.1
2778 Female, age 91, both hemispheres 0.1
Nucleus accumbens
nTPM: 0.3
1806 Female, age 85, left hemisphere 0.4
1856 Female, age 91, right hemisphere 0.4
2391 Female, age 94, left hemisphere 0.4
1783 Male, age 74, unknown 0.3
2698 Female, age 72, unknown 0.3
2824 Male, age 61, right hemisphere 0.3
2732 Male, age 80, right hemisphere 0.2
2286 Male, age 75, left hemisphere 0.1
Nucleus basalis of Meynert
nTPM: 0.4
2821 Male, age 75, both hemispheres 0.7
2393 Male, age 80, right hemisphere 0.3
2484 Female, age 94, left hemisphere 0.3
2569 Male, age 61, both hemispheres 0.1
Nucleus of the diagonal band
nTPM: 0.3
1979 Male, age 74, unknown 0.3
2029 Male, age 61, right hemisphere 0.3
2775 Male, age 80, right hemisphere 0.3
2195 Female, age 85, both hemispheres 0.2
1812 Female, age 91, both hemispheres 0.1
Olfactory tubercle
nTPM: 0.2
1846 Male, age 80, right hemisphere 0.3
2487 Female, age 94, left hemisphere 0.2
2856 Male, age 75, right hemisphere 0.2
1998 Female, age 91, both hemispheres 0.1
Putamen
nTPM: 0.3
2482 Female, age 94, left hemisphere 0.5
1937 Female, age 91, right hemisphere 0.3
2466 Female, age 79, unknown 0.3
2489 Female, age 72, unknown 0.3
1829 Male, age 74, unknown 0.2
1838 Male, age 80, right hemisphere 0.2
2647 Male, age 75, left hemisphere 0.2
Septal nuclei
nTPM: 0.3
2199 Male, age 80, right hemisphere 0.5
2009 Female, age 91, both hemispheres 0.3
2031 Female, age 72, unknown 0.3
2394 Male, age 61, left hemisphere 0.3
1960 Male, age 74, unknown 0.2
2059 Female, age 85, both hemispheres 0.2
2629 Female, age 94, right hemisphere 0.2

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 0.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.2
Samples: 246

Max nTPM: 1.3
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 0.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 0.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 0.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 0.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 0.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 0.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 0.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 0.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 0.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.3
Samples: 246

Max nTPM: 0.9
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 0.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 0.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 0.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 0.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 0.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 0.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 0.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 0.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 0.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 0.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 0.6
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Brain - Putamen (basal ganglia)
Average nTPM: 0.2
Samples: 205

Max nTPM: 0.8
Min nTPM: 0.0
Std nTPM: 0.1
Median nTPM: 0.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 0.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 0.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 0.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 0.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 0.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 0.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 0.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 0.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 0.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 0.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 0.5
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 0.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 0.1
FF:10164-103B2 76 years, female 0.1
Globus pallidus
Scaled Tags Per Million: 0.5
FF:10161-103A8 76 years, female 1.0
FF:10175-103C4 60 years, female 0.0
Nucleus accumbens
Scaled Tags Per Million: 0.1
FF:10037-101F1 23-56 years, mixed 0.1
Putamen
Scaled Tags Per Million: 0.0
FF:10176-103C5 60 years, female 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.