ABOUTMENU
HELP
NEWS
IL17RC
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.9 nTPM
HPA:5.9 nTPM
GTEx:10.0 nTPM
FANTOM5:13.6 Scaled Tags Per Million
Pig:4.4 nTPM
Mouse:2.1 nTPM

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 5.9
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 5.7
2586 Male, age 75, left hemisphere 11.2
2828 Female, age 72, unknown 6.2
1830 Male, age 51, unknown 5.6
1827 Male, age 72, unknown 5.3
2019 Male, age 18, unknown 5.3
2666 Male, age 74, left hemisphere 5.3
1833 Male, age 53, unknown 4.8
1870 Female, age 42, unknown 4.7
2411 Female, age 72, unknown 4.5
2219 Male, age 76, both hemispheres 3.9
Dorsal raphe nucleus
nTPM: 5.3
2016 Female, age 72, unknown 6.0
2047 Male, age 72, unknown 5.8
1828 Male, age 53, unknown 5.6
2750 Male, age 76, both hemispheres 4.7
2298 Female, age 72, unknown 4.5
Inferior colliculus
nTPM: 5.7
2097 Female, age 72, unknown 6.2
1890 Male, age 53, unknown 5.9
1848 Female, age 42, unknown 5.8
2849 Male, age 72, unknown 5.1
Median raphe nucleus
nTPM: 4.5
2220 Male, age 76, midline 4.5
Pedunculopontine tegmental nucleus
nTPM: 4.3
1921 Female, age 85, both hemispheres 4.9
2334 Male, age 80, both hemispheres 4.2
2338 Male, age 61, both hemispheres 3.7
Periaquaductal grey, anterior
nTPM: 5.5
2502 Female, age 75, unknown 6.0
1795 Male, age 51, unknown 5.4
1947 Male, age 18, unknown 5.0
Periaquaductal grey, dorsal
nTPM: 5.3
1840 Male, age 53, unknown 6.1
1831 Male, age 72, unknown 5.3
2464 Female, age 72, unknown 5.2
2850 Male, age 76, both hemispheres 4.4
Periaquaductal grey, lateral
nTPM: 5.3
2053 Male, age 18, unknown 6.2
2140 Male, age 76, both hemispheres 5.5
2272 Male, age 74, both hemispheres 4.2
Pretectal area
nTPM: 5.0
2407 Male, age 75, both hemispheres 5.7
2007 Male, age 72, unknown 5.5
1816 Male, age 51, unknown 5.2
1944 Female, age 72, unknown 5.2
2316 Male, age 76, right hemisphere 5.2
2667 Female, age 75, unknown 5.1
1815 Male, age 53, unknown 4.9
2825 Male, age 18, unknown 4.9
2273 Male, age 74, both hemispheres 4.8
1817 Female, age 42, unknown 4.6
2224 Female, age 72, unknown 4.3
Red nucleus
nTPM: 5.9
1954 Female, age 42, unknown 7.4
2588 Male, age 74, left hemisphere 7.2
2503 Female, age 72, unknown 6.9
1821 Female, age 72, unknown 6.2
2769 Male, age 72, unknown 6.2
1904 Male, age 53, unknown 5.5
2823 Male, age 76, right hemisphere 5.4
1865 Male, age 51, unknown 5.3
2227 Male, age 72, unknown 5.3
2725 Female, age 75, unknown 5.1
2584 Male, age 75, left hemisphere 5.0
2785 Male, age 18, unknown 4.8
Substantia nigra
nTPM: 5.8
2665 Male, age 74, both hemispheres 6.8
2699 Male, age 18, unknown 6.7
1889 Female, age 72, unknown 6.3
1916 Female, age 42, unknown 6.1
2583 Male, age 75, right hemisphere 6.0
2590 Female, age 75, unknown 5.9
1851 Male, age 51, unknown 5.6
2409 Female, age 72, unknown 5.1
2241 Male, age 72, unknown 5.0
1941 Male, age 53, unknown 4.2
Superior colliculus
nTPM: 5.3
2664 Male, age 75, both hemispheres 7.8
1796 Male, age 53, unknown 5.6
1995 Male, age 72, unknown 5.6
2261 Male, age 18, unknown 5.1
2668 Female, age 75, unknown 5.1
1839 Male, age 51, unknown 5.0
2087 Female, age 72, unknown 4.9
2587 Male, age 74, left hemisphere 4.9
1895 Male, age 76, right hemisphere 4.4
1913 Female, age 42, unknown 4.4
Ventral tegmental area
nTPM: 4.7
1915 Female, age 42, unknown 5.5
2021 Male, age 53, unknown 5.5
1942 Male, age 51, unknown 5.0
2410 Female, age 72, unknown 4.7
2223 Female, age 72, unknown 4.1
2218 Male, age 76, both hemispheres 3.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 10.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 10.0
Samples: 139

Max nTPM: 39.8
Min nTPM: 0.5
Std nTPM: 6.0
Median nTPM: 8.7
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 39.8
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 26.4
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 26.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 25.3
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 23.6
GTEX-1J1OQ-0011-R2b-SM-ARU88 40-49 years, female 23.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO 40-49 years, male 23.5
GTEX-ZDXO-0011-R2b-SM-4WKFG 60-69 years, male 22.7
GTEX-13CF2-0011-R2a-SM-5L3DC 60-69 years, male 21.1
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 20.8
GTEX-1GN2E-0011-R2a-SM-9WG7D 60-69 years, male 18.0
Show allShow less

MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 13.6
FF:10158-103A5 76 years, female 13.6

MIDBRAIN - Pig RNA-seqi
Average nTPM 4.4
Pig sample Sample description nTPM
Midbrain
nTPM: 4.0
Samples: 4

Max nTPM: 7.7
Min nTPM: 1.7
Sample A Female 7.7
Sample B Female 3.7
Sample C Male 3.0
Sample D Male 1.7
Periaqueductal gray
nTPM: 4.4
Samples: 3

Max nTPM: 5.0
Min nTPM: 3.7
Sample B Female 5.0
Sample C Male 4.4
Sample D Male 3.7
Substantia nigra
nTPM: 4.3
Samples: 4

Max nTPM: 5.8
Min nTPM: 3.4
Sample A Female 4.5
Sample B Female 5.8
Sample C Male 3.6
Sample D Male 3.4
Superior colliculi
nTPM: 4.5
Samples: 4

Max nTPM: 8.2
Min nTPM: 2.8
Sample A Female 3.9
Sample B Female 8.2
Sample C Male 2.8
Sample D Male 3.0

MIDBRAIN - Mouse RNA-seqi
Average nTPM 2.1
Mouse sample Sample description nTPM
Midbrain
nTPM: 2.1
Samples: 4

Max nTPM: 3.2
Min nTPM: 1.3
Sample A Male 3.2
Sample B Male 1.3
Sample C Female 1.7
Sample D Female 2.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.