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HMGB2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:33.2 nTPM
HPA:33.2 nTPM
GTEx:41.0 nTPM
FANTOM5:47.2 Scaled Tags Per Million
Pig:2.5 nTPM
Mouse:3.3 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003506Antibody HPA053314Antibody CAB037206
Glial cells HighNot detectedLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.2
Sample id Sample description nTPM
Hippocampus
nTPM: 32.8
2529 Female, age 94, left hemisphere 35.0
2148 Female, age 91, left hemisphere 32.5
1855 Male, age 76, left hemisphere 32.4
2621 Female, age 67, right hemisphere 32.4
1898 Male, age 80, left hemisphere 32.3
1911 Female, age 85, right hemisphere 32.0
Dentate gyrus
nTPM: 31.8
2010 Male, age 76, both hemispheres 35.1
2531 Female, age 67, both hemispheres 32.1
2246 Female, age 85, both hemispheres 31.5
2528 Male, age 74, both hemispheres 31.4
2530 Female, age 94, left hemisphere 30.5
1927 Female, age 91, both hemispheres 30.2
Entorhinal gyrus
nTPM: 32.4
2686 Male, age 75, right hemisphere 35.3
1787 Male, age 76, left hemisphere 33.5
2117 Female, age 91, right hemisphere 32.4
1938 Female, age 85, left hemisphere 31.7
2764 Male, age 80, right hemisphere 31.5
2613 Female, age 94, left hemisphere 30.2
Hippocampus, CA1
nTPM: 31.2
2045 Male, age 76, both hemispheres 32.4
2082 Female, age 91, right hemisphere 32.2
2527 Male, age 74, both hemispheres 31.9
1873 Female, age 85, both hemispheres 31.5
2749 Male, age 80, left hemisphere 28.0
Hippocampus, CA2
nTPM: 31.8
2113 Female, age 91, right hemisphere 33.5
1940 Female, age 85, left hemisphere 33.3
2249 Male, age 74, both hemispheres 31.8
2437 Female, age 94, left hemisphere 31.8
1892 Male, age 76, both hemispheres 30.6
1963 Male, age 80, left hemisphere 29.8
Hippocampus, CA3
nTPM: 31.7
1867 Male, age 76, both hemispheres 33.5
2861 Female, age 67, both hemispheres 32.2
2436 Male, age 74, both hemispheres 31.9
1891 Female, age 85, both hemispheres 31.8
2620 Female, age 94, left hemisphere 31.6
2137 Male, age 80, left hemisphere 29.3
Parahippocampal cortex
nTPM: 33.0
2018 Male, age 76, both hemispheres 35.9
2532 Female, age 72, left hemisphere 34.9
2622 Female, age 67, right hemisphere 33.9
2245 Female, age 91, both hemispheres 33.3
2692 Male, age 74, both hemispheres 32.4
1990 Female, age 91, right hemisphere 32.3
2250 Female, age 67, right hemisphere 32.3
1850 Male, age 80, both hemispheres 31.9
1933 Female, age 85, both hemispheres 31.8
2693 Female, age 94, both hemispheres 31.7
Perirhinal gyrus
nTPM: 32.5
1841 Female, age 85, right hemisphere 34.3
1794 Male, age 80, right hemisphere 33.0
2848 Male, age 76, right hemisphere 31.8
2521 Female, age 94, right hemisphere 31.7
1847 Female, age 91, left hemisphere 31.6
Subiculum
nTPM: 33.2
2438 Female, age 94, left hemisphere 35.9
2042 Male, age 76, both hemispheres 35.4
2619 Male, age 74, both hemispheres 32.9
1901 Male, age 80, both hemispheres 31.9
1977 Female, age 85, both hemispheres 31.7
2729 Female, age 91, right hemisphere 31.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.0
Samples: 197

Max nTPM: 205.0
Min nTPM: 16.3
Std nTPM: 22.7
Median nTPM: 34.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 205.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 131.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 122.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 116.3
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 115.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 102.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 97.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 91.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 91.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 88.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 84.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.2
FF:10153-102I9 76 years, female 47.3
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.5
Samples: 4

Max nTPM: 3.5
Min nTPM: 1.6
Sample A Female 3.5
Sample B Female 2.1
Sample C Male 2.6
Sample D Male 1.6
Entorhinal cortex
nTPM: 1.4
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.0
Sample A Female 1.3
Sample B Female 1.6
Sample C Male 1.5
Sample D Male 1.0
Subiculum
nTPM: 1.9
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.6
Sample A Female 2.4
Sample B Female 2.0
Sample C Male 1.7
Sample D Male 1.6
Ventral hippocampus
nTPM: 2.1
Samples: 4

Max nTPM: 2.6
Min nTPM: 1.7
Sample A Female 2.6
Sample B Female 2.1
Sample C Male 2.0
Sample D Male 1.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.1
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.6
Sample A Male 3.1
Sample B Male 3.0
Sample C Female 3.6
Sample D Female 2.6
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.9
Sample A Male 2.9
Sample B Male 3.0
Sample C Female 3.4
Sample D Female 4.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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