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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:70.3 nTPM
HPA:70.3 nTPM
GTEx:74.2 nTPM
FANTOM5:122.9 Scaled Tags Per Million
Pig:29.7 nTPM
Mouse:52.6 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003884
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 70.3
Sample id Sample description nTPM
Hippocampus
nTPM: 68.1
1898 Male, age 80, left hemisphere 74.7
2529 Female, age 94, left hemisphere 69.4
2621 Female, age 67, right hemisphere 66.9
2148 Female, age 91, left hemisphere 66.3
1911 Female, age 85, right hemisphere 66.0
1855 Male, age 76, left hemisphere 65.1
Dentate gyrus
nTPM: 67.3
1927 Female, age 91, both hemispheres 69.2
2010 Male, age 76, both hemispheres 68.4
2528 Male, age 74, both hemispheres 67.6
2530 Female, age 94, left hemisphere 67.3
2246 Female, age 85, both hemispheres 67.1
2531 Female, age 67, both hemispheres 64.4
Entorhinal gyrus
nTPM: 66.8
1938 Female, age 85, left hemisphere 69.3
2117 Female, age 91, right hemisphere 69.1
2764 Male, age 80, right hemisphere 69.1
1787 Male, age 76, left hemisphere 66.6
2686 Male, age 75, right hemisphere 65.3
2613 Female, age 94, left hemisphere 61.4
Hippocampus, CA1
nTPM: 70.0
2749 Male, age 80, left hemisphere 76.2
2527 Male, age 74, both hemispheres 71.3
1873 Female, age 85, both hemispheres 67.7
2082 Female, age 91, right hemisphere 67.6
2045 Male, age 76, both hemispheres 67.1
Hippocampus, CA2
nTPM: 69.1
1892 Male, age 76, both hemispheres 73.2
2249 Male, age 74, both hemispheres 72.7
1963 Male, age 80, left hemisphere 69.9
2113 Female, age 91, right hemisphere 66.9
2437 Female, age 94, left hemisphere 66.4
1940 Female, age 85, left hemisphere 65.7
Hippocampus, CA3
nTPM: 68.7
2436 Male, age 74, both hemispheres 73.9
1867 Male, age 76, both hemispheres 72.7
2137 Male, age 80, left hemisphere 71.4
1891 Female, age 85, both hemispheres 68.1
2620 Female, age 94, left hemisphere 64.0
2861 Female, age 67, both hemispheres 62.4
Parahippocampal cortex
nTPM: 67.3
1850 Male, age 80, both hemispheres 71.4
2250 Female, age 67, right hemisphere 70.0
1933 Female, age 85, both hemispheres 68.9
1990 Female, age 91, right hemisphere 68.4
2245 Female, age 91, both hemispheres 68.1
2018 Male, age 76, both hemispheres 67.8
2693 Female, age 94, both hemispheres 65.6
2622 Female, age 67, right hemisphere 64.6
2532 Female, age 72, left hemisphere 64.3
2692 Male, age 74, both hemispheres 64.0
Perirhinal gyrus
nTPM: 70.3
1847 Female, age 91, left hemisphere 73.5
1841 Female, age 85, right hemisphere 72.7
1794 Male, age 80, right hemisphere 72.2
2521 Female, age 94, right hemisphere 66.7
2848 Male, age 76, right hemisphere 66.6
Subiculum
nTPM: 66.6
1977 Female, age 85, both hemispheres 70.4
1901 Male, age 80, both hemispheres 70.0
2729 Female, age 91, right hemisphere 67.5
2042 Male, age 76, both hemispheres 66.0
2619 Male, age 74, both hemispheres 65.9
2438 Female, age 94, left hemisphere 59.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.2
Samples: 197

Max nTPM: 190.2
Min nTPM: 41.7
Std nTPM: 20.7
Median nTPM: 71.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 190.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 144.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 143.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 123.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 122.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 118.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 117.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 114.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 112.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 110.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 109.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 122.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 122.9
FF:10169-103B7 60 years, female 138.1
FF:10153-102I9 76 years, female 107.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.7
Samples: 4

Max nTPM: 38.2
Min nTPM: 25.1
Sample A Female 38.2
Sample B Female 27.4
Sample C Male 27.9
Sample D Male 25.1
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 38.9
Min nTPM: 20.8
Sample A Female 24.3
Sample B Female 38.9
Sample C Male 25.3
Sample D Male 20.8
Subiculum
nTPM: 24.7
Samples: 4

Max nTPM: 30.4
Min nTPM: 22.0
Sample A Female 30.4
Sample B Female 22.8
Sample C Male 22.0
Sample D Male 23.6
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 22.0
Sample A Female 31.4
Sample B Female 24.7
Sample C Male 22.0
Sample D Male 25.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.8
Samples: 4

Max nTPM: 51.2
Min nTPM: 42.0
Sample A Male 42.7
Sample B Male 51.2
Sample C Female 51.1
Sample D Female 42.0
Hippocampal formation
nTPM: 52.6
Samples: 4

Max nTPM: 60.5
Min nTPM: 48.6
Sample A Male 60.5
Sample B Male 51.2
Sample C Female 50.1
Sample D Female 48.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
393253 Antisense, RP_040809_01_A03, Mouse strain C57BL/6J (56 days, male) 9.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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