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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.9 nTPM
HPA:31.9 nTPM
GTEx:17.5 nTPM
FANTOM5:16.2 Scaled Tags Per Million
Pig:69.6 nTPM
Mouse:148.3 nTPM
Allen mouse:7.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody CAB018364
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 5.5
2148 Female, age 91, left hemisphere 16.3
2621 Female, age 67, right hemisphere 8.6
2529 Female, age 94, left hemisphere 5.4
1898 Male, age 80, left hemisphere 2.6
1855 Male, age 76, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
Dentate gyrus
nTPM: 13.4
2531 Female, age 67, both hemispheres 42.2
1927 Female, age 91, both hemispheres 25.6
2528 Male, age 74, both hemispheres 11.8
2246 Female, age 85, both hemispheres 0.9
2010 Male, age 76, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
Entorhinal gyrus
nTPM: 31.9
2613 Female, age 94, left hemisphere 57.9
1787 Male, age 76, left hemisphere 42.4
1938 Female, age 85, left hemisphere 40.2
2764 Male, age 80, right hemisphere 34.7
2686 Male, age 75, right hemisphere 14.1
2117 Female, age 91, right hemisphere 2.2
Hippocampus, CA1
nTPM: 4.6
2749 Male, age 80, left hemisphere 11.4
2045 Male, age 76, both hemispheres 9.0
2527 Male, age 74, both hemispheres 2.7
1873 Female, age 85, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 3.6
1892 Male, age 76, both hemispheres 13.8
2437 Female, age 94, left hemisphere 8.1
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
Hippocampus, CA3
nTPM: 20.0
2620 Female, age 94, left hemisphere 58.1
2861 Female, age 67, both hemispheres 35.1
1867 Male, age 76, both hemispheres 13.3
2137 Male, age 80, left hemisphere 8.1
1891 Female, age 85, both hemispheres 5.2
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 22.8
1990 Female, age 91, right hemisphere 47.2
2692 Male, age 74, both hemispheres 40.1
1850 Male, age 80, both hemispheres 24.5
2250 Female, age 67, right hemisphere 22.6
2693 Female, age 94, both hemispheres 20.9
2622 Female, age 67, right hemisphere 20.7
2245 Female, age 91, both hemispheres 19.3
1933 Female, age 85, both hemispheres 18.7
2532 Female, age 72, left hemisphere 13.8
2018 Male, age 76, both hemispheres 0.0
Perirhinal gyrus
nTPM: 31.0
1847 Female, age 91, left hemisphere 65.5
2521 Female, age 94, right hemisphere 31.5
2848 Male, age 76, right hemisphere 20.1
1794 Male, age 80, right hemisphere 19.0
1841 Female, age 85, right hemisphere 18.9
Subiculum
nTPM: 11.2
2619 Male, age 74, both hemispheres 26.0
1977 Female, age 85, both hemispheres 24.8
2438 Female, age 94, left hemisphere 10.9
1901 Male, age 80, both hemispheres 3.2
2729 Female, age 91, right hemisphere 2.2
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.5
Samples: 197

Max nTPM: 70.6
Min nTPM: 1.3
Std nTPM: 12.9
Median nTPM: 14.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 70.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 68.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 61.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 59.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 58.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 55.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 47.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 47.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 45.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 44.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 43.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.2
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.7
Samples: 4

Max nTPM: 47.4
Min nTPM: 24.4
Sample A Female 24.4
Sample B Female 31.6
Sample C Male 27.2
Sample D Male 47.4
Entorhinal cortex
nTPM: 69.6
Samples: 4

Max nTPM: 73.8
Min nTPM: 64.6
Sample A Female 73.8
Sample B Female 70.5
Sample C Male 64.6
Sample D Male 69.6
Subiculum
nTPM: 38.1
Samples: 4

Max nTPM: 59.6
Min nTPM: 26.6
Sample A Female 59.6
Sample B Female 32.5
Sample C Male 33.7
Sample D Male 26.6
Ventral hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 30.5
Min nTPM: 12.1
Sample A Female 12.1
Sample B Female 25.3
Sample C Male 30.5
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 148.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 138.1
Samples: 4

Max nTPM: 155.2
Min nTPM: 128.0
Sample A Male 155.2
Sample B Male 135.3
Sample C Female 134.0
Sample D Female 128.0
Hippocampal formation
nTPM: 148.3
Samples: 4

Max nTPM: 191.4
Min nTPM: 117.7
Sample A Male 123.0
Sample B Male 161.2
Sample C Female 191.4
Sample D Female 117.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.8
71 Antisense, RP_Baylor_102607, Mouse strain C57BL/6J (56 days, male) 7.9
71212473 Antisense, RP_050816_03_D01, Mouse strain C57BL/6J (56 days, male) 7.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.