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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:34.8 nTPM
HPA:34.8 nTPM
GTEx:38.4 nTPM
FANTOM5:27.7 Scaled Tags Per Million
Pig:17.6 nTPM
Mouse:45.1 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031621Antibody CAB032539
Glial cells LowNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.8
Sample id Sample description nTPM
Hippocampus
nTPM: 34.1
1898 Male, age 80, left hemisphere 36.5
2529 Female, age 94, left hemisphere 34.6
2621 Female, age 67, right hemisphere 34.5
2148 Female, age 91, left hemisphere 33.9
1911 Female, age 85, right hemisphere 33.1
1855 Male, age 76, left hemisphere 32.2
Dentate gyrus
nTPM: 33.5
1927 Female, age 91, both hemispheres 35.6
2530 Female, age 94, left hemisphere 34.8
2531 Female, age 67, both hemispheres 33.8
2010 Male, age 76, both hemispheres 32.8
2528 Male, age 74, both hemispheres 32.4
2246 Female, age 85, both hemispheres 31.5
Entorhinal gyrus
nTPM: 34.5
2613 Female, age 94, left hemisphere 37.4
2764 Male, age 80, right hemisphere 36.8
2117 Female, age 91, right hemisphere 33.7
1787 Male, age 76, left hemisphere 33.5
2686 Male, age 75, right hemisphere 32.9
1938 Female, age 85, left hemisphere 32.8
Hippocampus, CA1
nTPM: 33.7
2749 Male, age 80, left hemisphere 37.9
2527 Male, age 74, both hemispheres 33.7
1873 Female, age 85, both hemispheres 33.6
2082 Female, age 91, right hemisphere 31.8
2045 Male, age 76, both hemispheres 31.7
Hippocampus, CA2
nTPM: 34.2
1963 Male, age 80, left hemisphere 40.6
1892 Male, age 76, both hemispheres 35.2
2437 Female, age 94, left hemisphere 33.1
2113 Female, age 91, right hemisphere 32.4
1940 Female, age 85, left hemisphere 32.3
2249 Male, age 74, both hemispheres 31.4
Hippocampus, CA3
nTPM: 33.8
2137 Male, age 80, left hemisphere 36.8
2861 Female, age 67, both hemispheres 35.5
1867 Male, age 76, both hemispheres 32.9
2620 Female, age 94, left hemisphere 32.7
2436 Male, age 74, both hemispheres 32.5
1891 Female, age 85, both hemispheres 32.4
Parahippocampal cortex
nTPM: 32.9
2622 Female, age 67, right hemisphere 34.4
2693 Female, age 94, both hemispheres 33.7
1850 Male, age 80, both hemispheres 33.6
1990 Female, age 91, right hemisphere 33.6
2692 Male, age 74, both hemispheres 33.5
1933 Female, age 85, both hemispheres 33.4
2245 Female, age 91, both hemispheres 32.7
2532 Female, age 72, left hemisphere 31.8
2018 Male, age 76, both hemispheres 31.3
2250 Female, age 67, right hemisphere 31.3
Perirhinal gyrus
nTPM: 34.8
1794 Male, age 80, right hemisphere 36.8
1847 Female, age 91, left hemisphere 35.2
2521 Female, age 94, right hemisphere 35.0
1841 Female, age 85, right hemisphere 33.6
2848 Male, age 76, right hemisphere 33.4
Subiculum
nTPM: 32.3
2619 Male, age 74, both hemispheres 34.2
1901 Male, age 80, both hemispheres 33.2
2729 Female, age 91, right hemisphere 32.1
2438 Female, age 94, left hemisphere 31.9
1977 Female, age 85, both hemispheres 31.3
2042 Male, age 76, both hemispheres 31.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.4
Samples: 197

Max nTPM: 90.8
Min nTPM: 10.3
Std nTPM: 13.3
Median nTPM: 36.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 90.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 78.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 77.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 70.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 69.7
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 67.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 66.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 66.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 64.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 63.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 62.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.7
FF:10153-102I9 76 years, female 29.2
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 18.2
Min nTPM: 11.7
Sample A Female 18.2
Sample B Female 14.4
Sample C Male 17.8
Sample D Male 11.7
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 20.6
Min nTPM: 15.5
Sample A Female 16.9
Sample B Female 17.6
Sample C Male 20.6
Sample D Male 15.5
Subiculum
nTPM: 15.1
Samples: 4

Max nTPM: 17.5
Min nTPM: 14.2
Sample A Female 17.5
Sample B Female 14.5
Sample C Male 14.2
Sample D Male 14.2
Ventral hippocampus
nTPM: 15.4
Samples: 4

Max nTPM: 18.6
Min nTPM: 12.6
Sample A Female 14.2
Sample B Female 12.6
Sample C Male 18.6
Sample D Male 16.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.1
Samples: 4

Max nTPM: 47.7
Min nTPM: 42.7
Sample A Male 46.2
Sample B Male 47.7
Sample C Female 43.7
Sample D Female 42.7
Hippocampal formation
nTPM: 42.7
Samples: 4

Max nTPM: 45.8
Min nTPM: 40.0
Sample A Male 40.0
Sample B Male 42.7
Sample C Female 42.4
Sample D Female 45.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
71610819 Antisense, RP_050927_01_H07, Mouse strain C57BL/6J (56 days, male) 10.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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