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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:24.9 nTPM
HPA:24.9 nTPM
GTEx:36.9 nTPM
FANTOM5:6.6 Scaled Tags Per Million
Pig:13.9 nTPM
Mouse:25.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029429
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.9
Sample id Sample description nTPM
Hippocampus
nTPM: 24.9
2621 Female, age 67, right hemisphere 26.8
2529 Female, age 94, left hemisphere 26.0
1855 Male, age 76, left hemisphere 24.6
2148 Female, age 91, left hemisphere 24.6
1911 Female, age 85, right hemisphere 23.9
1898 Male, age 80, left hemisphere 23.6
Dentate gyrus
nTPM: 24.9
2010 Male, age 76, both hemispheres 28.1
2530 Female, age 94, left hemisphere 27.7
2531 Female, age 67, both hemispheres 24.9
2528 Male, age 74, both hemispheres 23.9
2246 Female, age 85, both hemispheres 22.5
1927 Female, age 91, both hemispheres 22.1
Entorhinal gyrus
nTPM: 24.4
2686 Male, age 75, right hemisphere 25.4
2117 Female, age 91, right hemisphere 24.9
2764 Male, age 80, right hemisphere 24.9
2613 Female, age 94, left hemisphere 24.8
1787 Male, age 76, left hemisphere 24.2
1938 Female, age 85, left hemisphere 22.1
Hippocampus, CA1
nTPM: 23.6
2045 Male, age 76, both hemispheres 26.6
2749 Male, age 80, left hemisphere 24.0
1873 Female, age 85, both hemispheres 23.3
2527 Male, age 74, both hemispheres 22.6
2082 Female, age 91, right hemisphere 21.3
Hippocampus, CA2
nTPM: 23.1
1892 Male, age 76, both hemispheres 26.2
2437 Female, age 94, left hemisphere 25.9
1963 Male, age 80, left hemisphere 24.0
1940 Female, age 85, left hemisphere 21.2
2249 Male, age 74, both hemispheres 20.9
2113 Female, age 91, right hemisphere 20.4
Hippocampus, CA3
nTPM: 24.8
2861 Female, age 67, both hemispheres 29.5
1867 Male, age 76, both hemispheres 27.3
2620 Female, age 94, left hemisphere 24.4
2137 Male, age 80, left hemisphere 23.4
2436 Male, age 74, both hemispheres 22.3
1891 Female, age 85, both hemispheres 21.8
Parahippocampal cortex
nTPM: 23.2
2622 Female, age 67, right hemisphere 26.3
2245 Female, age 91, both hemispheres 26.1
2532 Female, age 72, left hemisphere 24.6
2692 Male, age 74, both hemispheres 24.6
2018 Male, age 76, both hemispheres 22.5
1933 Female, age 85, both hemispheres 22.4
2250 Female, age 67, right hemisphere 22.0
2693 Female, age 94, both hemispheres 21.3
1990 Female, age 91, right hemisphere 21.2
1850 Male, age 80, both hemispheres 20.6
Perirhinal gyrus
nTPM: 22.0
2521 Female, age 94, right hemisphere 22.8
1794 Male, age 80, right hemisphere 22.2
2848 Male, age 76, right hemisphere 22.1
1841 Female, age 85, right hemisphere 21.7
1847 Female, age 91, left hemisphere 21.3
Subiculum
nTPM: 24.2
2619 Male, age 74, both hemispheres 26.1
2042 Male, age 76, both hemispheres 25.9
2438 Female, age 94, left hemisphere 25.6
1901 Male, age 80, both hemispheres 24.1
1977 Female, age 85, both hemispheres 22.1
2729 Female, age 91, right hemisphere 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.9
Samples: 197

Max nTPM: 70.3
Min nTPM: 14.9
Std nTPM: 9.6
Median nTPM: 35.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 70.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 66.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 63.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 59.1
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 57.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 57.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 56.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 56.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 56.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 55.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 54.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.6
FF:10153-102I9 76 years, female 10.2
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 15.6
Min nTPM: 10.8
Sample A Female 15.6
Sample B Female 13.5
Sample C Male 15.5
Sample D Male 10.8
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.6
Min nTPM: 11.6
Sample A Female 14.6
Sample B Female 12.8
Sample C Male 13.7
Sample D Male 11.6
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 17.6
Min nTPM: 11.0
Sample A Female 17.6
Sample B Female 12.2
Sample C Male 14.4
Sample D Male 11.0
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 17.6
Min nTPM: 10.0
Sample A Female 12.7
Sample B Female 10.0
Sample C Male 17.6
Sample D Male 13.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 26.9
Min nTPM: 22.9
Sample A Male 26.0
Sample B Male 25.1
Sample C Female 22.9
Sample D Female 26.9
Hippocampal formation
nTPM: 19.9
Samples: 4

Max nTPM: 22.0
Min nTPM: 18.4
Sample A Male 18.7
Sample B Male 18.4
Sample C Female 20.3
Sample D Female 22.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
601186 Antisense, RP_040831_01_H04, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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