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DYNLT3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:33.4 nTPM
HPA:33.4 nTPM
GTEx:45.0 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:27.5 nTPM
Mouse:143.4 nTPM
Allen mouse:5.5 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 33.4
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 25.3
2411 Female, age 72, unknown 29.5
1827 Male, age 72, unknown 27.1
1870 Female, age 42, unknown 27.1
2666 Male, age 74, left hemisphere 26.6
2019 Male, age 18, unknown 26.0
2586 Male, age 75, left hemisphere 24.7
2219 Male, age 76, both hemispheres 24.0
1830 Male, age 51, unknown 23.3
1833 Male, age 53, unknown 23.0
2828 Female, age 72, unknown 21.4
Dorsal raphe nucleus
nTPM: 30.4
2298 Female, age 72, unknown 36.0
2047 Male, age 72, unknown 32.9
2750 Male, age 76, both hemispheres 30.4
1828 Male, age 53, unknown 29.7
2016 Female, age 72, unknown 23.1
Inferior colliculus
nTPM: 23.2
2097 Female, age 72, unknown 28.0
1890 Male, age 53, unknown 23.5
1848 Female, age 42, unknown 21.9
2849 Male, age 72, unknown 19.4
Median raphe nucleus
nTPM: 33.4
2220 Male, age 76, midline 33.4
Pedunculopontine tegmental nucleus
nTPM: 28.4
1921 Female, age 85, both hemispheres 31.4
2334 Male, age 80, both hemispheres 27.8
2338 Male, age 61, both hemispheres 26.2
Periaquaductal grey, anterior
nTPM: 30.7
1947 Male, age 18, unknown 34.4
2502 Female, age 75, unknown 29.9
1795 Male, age 51, unknown 27.7
Periaquaductal grey, dorsal
nTPM: 23.2
2850 Male, age 76, both hemispheres 24.5
2464 Female, age 72, unknown 23.2
1831 Male, age 72, unknown 23.1
1840 Male, age 53, unknown 22.0
Periaquaductal grey, lateral
nTPM: 22.3
2272 Male, age 74, both hemispheres 23.3
2053 Male, age 18, unknown 23.1
2140 Male, age 76, both hemispheres 20.5
Pretectal area
nTPM: 27.3
1944 Female, age 72, unknown 34.0
1816 Male, age 51, unknown 32.7
2007 Male, age 72, unknown 29.9
2224 Female, age 72, unknown 29.5
1817 Female, age 42, unknown 29.0
1815 Male, age 53, unknown 28.1
2667 Female, age 75, unknown 26.1
2273 Male, age 74, both hemispheres 24.6
2825 Male, age 18, unknown 23.2
2407 Male, age 75, both hemispheres 22.9
2316 Male, age 76, right hemisphere 20.4
Red nucleus
nTPM: 23.8
1821 Female, age 72, unknown 30.3
2725 Female, age 75, unknown 26.1
1954 Female, age 42, unknown 24.6
2785 Male, age 18, unknown 24.2
2584 Male, age 75, left hemisphere 24.0
1865 Male, age 51, unknown 23.6
1904 Male, age 53, unknown 22.8
2823 Male, age 76, right hemisphere 22.1
2227 Male, age 72, unknown 22.0
2588 Male, age 74, left hemisphere 22.0
2769 Male, age 72, unknown 22.0
2503 Female, age 72, unknown 21.8
Substantia nigra
nTPM: 30.7
2241 Male, age 72, unknown 40.4
1941 Male, age 53, unknown 36.9
1889 Female, age 72, unknown 33.6
1916 Female, age 42, unknown 32.0
1851 Male, age 51, unknown 31.4
2409 Female, age 72, unknown 30.4
2665 Male, age 74, both hemispheres 26.1
2699 Male, age 18, unknown 25.8
2583 Male, age 75, right hemisphere 25.6
2590 Female, age 75, unknown 25.1
Superior colliculus
nTPM: 24.5
2087 Female, age 72, unknown 27.8
2668 Female, age 75, unknown 27.3
2261 Male, age 18, unknown 26.4
1796 Male, age 53, unknown 25.7
2664 Male, age 75, both hemispheres 25.2
2587 Male, age 74, left hemisphere 23.7
1895 Male, age 76, right hemisphere 22.7
1839 Male, age 51, unknown 22.6
1913 Female, age 42, unknown 22.6
1995 Male, age 72, unknown 20.7
Ventral tegmental area
nTPM: 27.8
2410 Female, age 72, unknown 31.2
1915 Female, age 42, unknown 29.6
1942 Male, age 51, unknown 28.4
2218 Male, age 76, both hemispheres 27.9
2223 Female, age 72, unknown 24.9
2021 Male, age 53, unknown 24.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 45.0
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 45.0
Samples: 139

Max nTPM: 153.9
Min nTPM: 13.0
Std nTPM: 25.7
Median nTPM: 38.2
GTEX-1B8L1-0011-R2a-SM-9OSVL 60-69 years, male 153.9
GTEX-Z93S-0011-R2a-SM-4RGNG 50-59 years, male 146.8
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 130.5
GTEX-15ER7-0011-R2a-SM-6M46O 20-29 years, female 128.8
GTEX-1313W-0011-R2a-SM-5EGLF 50-59 years, female 118.4
GTEX-QDT8-0011-R2A-SM-32PKQ 30-39 years, female 100.0
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 87.9
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 86.2
GTEX-1399T-0011-R2b-SM-5DUXM 60-69 years, male 84.3
GTEX-13G51-0011-R2b-SM-5LZXS 60-69 years, male 82.6
GTEX-13SLX-0011-R2b-SM-5S2VP 50-59 years, female 79.9
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 37.1
FF:10158-103A5 76 years, female 37.1

MIDBRAIN - Pig RNA-seqi
Average nTPM 27.5
Pig sample Sample description nTPM
Midbrain
nTPM: 21.6
Samples: 4

Max nTPM: 31.8
Min nTPM: 15.1
Sample A Female 15.1
Sample B Female 19.1
Sample C Male 31.8
Sample D Male 20.2
Periaqueductal gray
nTPM: 14.8
Samples: 3

Max nTPM: 15.6
Min nTPM: 14.4
Sample B Female 14.5
Sample C Male 15.6
Sample D Male 14.4
Substantia nigra
nTPM: 22.3
Samples: 4

Max nTPM: 31.3
Min nTPM: 13.0
Sample A Female 31.3
Sample B Female 20.6
Sample C Male 24.3
Sample D Male 13.0
Superior colliculi
nTPM: 27.5
Samples: 4

Max nTPM: 39.2
Min nTPM: 20.4
Sample A Female 27.1
Sample B Female 20.4
Sample C Male 39.2
Sample D Male 23.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 143.4
Mouse sample Sample description nTPM
Midbrain
nTPM: 143.4
Samples: 4

Max nTPM: 151.3
Min nTPM: 137.7
Sample A Male 144.0
Sample B Male 151.3
Sample C Female 137.7
Sample D Female 140.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 5.5
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 5.5
74425518 Antisense, RP_051214_02_E04, Mouse strain C57BL/6J (56 days, male) 6.6
68910974 Antisense, RP_050118_02_H12, Mouse strain C57BL/6J (56 days, male) 4.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.