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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:60.4 nTPM
HPA:60.4 nTPM
GTEx:38.9 nTPM
FANTOM5:112.2 Scaled Tags Per Million
Pig:74.3 nTPM
Mouse:204.2 nTPM
Allen mouse:14.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012728Antibody HPA012814Antibody CAB005593
Glial cells MediumHighNot detected
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.4
Sample id Sample description nTPM
Hippocampus
nTPM: 55.9
1898 Male, age 80, left hemisphere 64.3
1855 Male, age 76, left hemisphere 59.6
2529 Female, age 94, left hemisphere 55.6
2621 Female, age 67, right hemisphere 54.6
2148 Female, age 91, left hemisphere 50.8
1911 Female, age 85, right hemisphere 50.5
Dentate gyrus
nTPM: 55.1
2010 Male, age 76, both hemispheres 60.6
1927 Female, age 91, both hemispheres 58.4
2530 Female, age 94, left hemisphere 56.0
2528 Male, age 74, both hemispheres 55.2
2246 Female, age 85, both hemispheres 50.5
2531 Female, age 67, both hemispheres 50.1
Entorhinal gyrus
nTPM: 56.8
2764 Male, age 80, right hemisphere 62.9
1787 Male, age 76, left hemisphere 60.4
1938 Female, age 85, left hemisphere 57.7
2613 Female, age 94, left hemisphere 56.5
2117 Female, age 91, right hemisphere 53.2
2686 Male, age 75, right hemisphere 50.2
Hippocampus, CA1
nTPM: 56.7
2749 Male, age 80, left hemisphere 67.3
1873 Female, age 85, both hemispheres 58.1
2045 Male, age 76, both hemispheres 55.2
2527 Male, age 74, both hemispheres 53.9
2082 Female, age 91, right hemisphere 49.0
Hippocampus, CA2
nTPM: 56.5
1892 Male, age 76, both hemispheres 63.0
1963 Male, age 80, left hemisphere 58.1
1940 Female, age 85, left hemisphere 57.3
2249 Male, age 74, both hemispheres 55.6
2437 Female, age 94, left hemisphere 54.5
2113 Female, age 91, right hemisphere 50.5
Hippocampus, CA3
nTPM: 56.8
2436 Male, age 74, both hemispheres 62.7
1867 Male, age 76, both hemispheres 58.5
2620 Female, age 94, left hemisphere 58.5
2137 Male, age 80, left hemisphere 57.0
1891 Female, age 85, both hemispheres 54.2
2861 Female, age 67, both hemispheres 50.2
Parahippocampal cortex
nTPM: 54.7
1850 Male, age 80, both hemispheres 62.6
1933 Female, age 85, both hemispheres 61.9
1990 Female, age 91, right hemisphere 55.2
2250 Female, age 67, right hemisphere 55.2
2693 Female, age 94, both hemispheres 55.2
2245 Female, age 91, both hemispheres 53.5
2532 Female, age 72, left hemisphere 53.4
2018 Male, age 76, both hemispheres 52.6
2692 Male, age 74, both hemispheres 51.1
2622 Female, age 67, right hemisphere 46.3
Perirhinal gyrus
nTPM: 60.4
1847 Female, age 91, left hemisphere 66.8
1794 Male, age 80, right hemisphere 64.4
1841 Female, age 85, right hemisphere 61.5
2521 Female, age 94, right hemisphere 56.1
2848 Male, age 76, right hemisphere 53.4
Subiculum
nTPM: 52.8
1901 Male, age 80, both hemispheres 59.1
1977 Female, age 85, both hemispheres 58.5
2042 Male, age 76, both hemispheres 54.2
2619 Male, age 74, both hemispheres 53.1
2729 Female, age 91, right hemisphere 48.1
2438 Female, age 94, left hemisphere 43.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.9
Samples: 197

Max nTPM: 54.6
Min nTPM: 24.4
Std nTPM: 5.3
Median nTPM: 38.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 54.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 52.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 52.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 51.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 51.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 50.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 50.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 50.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 50.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 49.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 49.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.2
FF:10169-103B7 60 years, female 126.6
FF:10153-102I9 76 years, female 97.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 74.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 74.3
Samples: 4

Max nTPM: 95.0
Min nTPM: 55.7
Sample A Female 95.0
Sample B Female 74.6
Sample C Male 72.0
Sample D Male 55.7
Entorhinal cortex
nTPM: 67.9
Samples: 4

Max nTPM: 73.8
Min nTPM: 56.5
Sample A Female 71.4
Sample B Female 73.8
Sample C Male 69.8
Sample D Male 56.5
Subiculum
nTPM: 69.3
Samples: 4

Max nTPM: 83.7
Min nTPM: 62.7
Sample A Female 83.7
Sample B Female 64.7
Sample C Male 66.0
Sample D Male 62.7
Ventral hippocampus
nTPM: 71.9
Samples: 4

Max nTPM: 89.4
Min nTPM: 53.6
Sample A Female 72.3
Sample B Female 53.6
Sample C Male 89.4
Sample D Male 72.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 204.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 200.1
Samples: 4

Max nTPM: 247.4
Min nTPM: 178.8
Sample A Male 189.1
Sample B Male 178.8
Sample C Female 185.2
Sample D Female 247.4
Hippocampal formation
nTPM: 204.2
Samples: 4

Max nTPM: 229.3
Min nTPM: 179.7
Sample A Male 179.7
Sample B Male 211.5
Sample C Female 229.3
Sample D Female 196.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.9
70194910 Antisense, RP_050517_02_A05, Mouse strain C57BL/6J (56 days, male) 14.9

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The Human Protein Atlas

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