ABOUTMENU
HELP
NEWS
REEP3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.8 nTPM
HPA:9.8 nTPM
GTEx:12.9 nTPM
FANTOM5:32.1 Scaled Tags Per Million
Pig:35.5 nTPM
Mouse:17.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.8
Sample id Sample description nTPM
Hippocampus
nTPM: 8.0
1911 Female, age 85, right hemisphere 10.1
2529 Female, age 94, left hemisphere 9.1
1898 Male, age 80, left hemisphere 8.3
1855 Male, age 76, left hemisphere 8.2
2621 Female, age 67, right hemisphere 6.9
2148 Female, age 91, left hemisphere 5.5
Dentate gyrus
nTPM: 7.9
2530 Female, age 94, left hemisphere 13.3
2528 Male, age 74, both hemispheres 8.6
2010 Male, age 76, both hemispheres 8.3
2246 Female, age 85, both hemispheres 6.7
2531 Female, age 67, both hemispheres 5.2
1927 Female, age 91, both hemispheres 5.0
Entorhinal gyrus
nTPM: 7.0
2117 Female, age 91, right hemisphere 12.0
1938 Female, age 85, left hemisphere 7.3
2764 Male, age 80, right hemisphere 6.3
1787 Male, age 76, left hemisphere 5.8
2686 Male, age 75, right hemisphere 5.7
2613 Female, age 94, left hemisphere 5.1
Hippocampus, CA1
nTPM: 6.4
1873 Female, age 85, both hemispheres 8.0
2527 Male, age 74, both hemispheres 7.7
2082 Female, age 91, right hemisphere 6.7
2749 Male, age 80, left hemisphere 5.0
2045 Male, age 76, both hemispheres 4.3
Hippocampus, CA2
nTPM: 8.1
2249 Male, age 74, both hemispheres 11.0
1963 Male, age 80, left hemisphere 8.7
2437 Female, age 94, left hemisphere 8.1
1940 Female, age 85, left hemisphere 8.0
2113 Female, age 91, right hemisphere 7.9
1892 Male, age 76, both hemispheres 5.1
Hippocampus, CA3
nTPM: 6.5
1891 Female, age 85, both hemispheres 11.3
2436 Male, age 74, both hemispheres 8.4
1867 Male, age 76, both hemispheres 7.2
2137 Male, age 80, left hemisphere 4.5
2861 Female, age 67, both hemispheres 3.9
2620 Female, age 94, left hemisphere 3.7
Parahippocampal cortex
nTPM: 6.5
2692 Male, age 74, both hemispheres 9.2
2532 Female, age 72, left hemisphere 7.9
2018 Male, age 76, both hemispheres 7.4
1990 Female, age 91, right hemisphere 7.3
1850 Male, age 80, both hemispheres 6.5
1933 Female, age 85, both hemispheres 6.5
2245 Female, age 91, both hemispheres 6.2
2693 Female, age 94, both hemispheres 5.8
2250 Female, age 67, right hemisphere 5.7
2622 Female, age 67, right hemisphere 2.6
Perirhinal gyrus
nTPM: 4.6
2521 Female, age 94, right hemisphere 5.6
2848 Male, age 76, right hemisphere 5.3
1841 Female, age 85, right hemisphere 4.7
1794 Male, age 80, right hemisphere 4.2
1847 Female, age 91, left hemisphere 3.3
Subiculum
nTPM: 9.8
2042 Male, age 76, both hemispheres 14.3
1901 Male, age 80, both hemispheres 12.8
1977 Female, age 85, both hemispheres 9.3
2729 Female, age 91, right hemisphere 8.1
2438 Female, age 94, left hemisphere 8.0
2619 Male, age 74, both hemispheres 6.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.9
Samples: 197

Max nTPM: 42.5
Min nTPM: 2.9
Std nTPM: 7.1
Median nTPM: 11.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 42.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 34.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 34.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 34.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 31.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 31.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 30.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 29.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 28.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 28.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 27.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.1
FF:10153-102I9 76 years, female 38.1
FF:10169-103B7 60 years, female 26.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.5
Samples: 4

Max nTPM: 49.7
Min nTPM: 17.2
Sample A Female 46.5
Sample B Female 28.6
Sample C Male 49.7
Sample D Male 17.2
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.9
Sample A Female 16.9
Sample B Female 23.5
Sample C Male 18.1
Sample D Male 17.7
Subiculum
nTPM: 23.1
Samples: 4

Max nTPM: 25.1
Min nTPM: 21.1
Sample A Female 22.9
Sample B Female 23.3
Sample C Male 21.1
Sample D Male 25.1
Ventral hippocampus
nTPM: 25.3
Samples: 4

Max nTPM: 29.9
Min nTPM: 21.1
Sample A Female 28.7
Sample B Female 21.1
Sample C Male 21.4
Sample D Male 29.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.3
Samples: 4

Max nTPM: 16.8
Min nTPM: 12.5
Sample A Male 16.8
Sample B Male 13.9
Sample C Female 13.9
Sample D Female 12.5
Hippocampal formation
nTPM: 17.0
Samples: 4

Max nTPM: 21.1
Min nTPM: 14.4
Sample A Male 14.4
Sample B Male 15.9
Sample C Female 21.1
Sample D Female 16.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
633686 Antisense, RP_040907_02_B06, Mouse strain C57BL/6J (56 days, male) 0.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.