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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:360.8 nTPM
HPA:360.8 nTPM
GTEx:496.8 nTPM
FANTOM5:349.5 Scaled Tags Per Million
Pig:245.0 nTPM
Mouse:567.9 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044316
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 360.8
Sample id Sample description nTPM
Hippocampus
nTPM: 360.8
2621 Female, age 67, right hemisphere 454.6
2148 Female, age 91, left hemisphere 392.1
1911 Female, age 85, right hemisphere 390.8
1855 Male, age 76, left hemisphere 339.1
2529 Female, age 94, left hemisphere 320.7
1898 Male, age 80, left hemisphere 267.3
Dentate gyrus
nTPM: 324.0
1927 Female, age 91, both hemispheres 464.2
2531 Female, age 67, both hemispheres 359.1
2530 Female, age 94, left hemisphere 344.9
2010 Male, age 76, both hemispheres 323.9
2528 Male, age 74, both hemispheres 251.1
2246 Female, age 85, both hemispheres 201.1
Entorhinal gyrus
nTPM: 187.0
2613 Female, age 94, left hemisphere 268.2
1938 Female, age 85, left hemisphere 180.6
1787 Male, age 76, left hemisphere 171.3
2117 Female, age 91, right hemisphere 170.2
2686 Male, age 75, right hemisphere 168.1
2764 Male, age 80, right hemisphere 163.5
Hippocampus, CA1
nTPM: 316.5
2749 Male, age 80, left hemisphere 473.2
2527 Male, age 74, both hemispheres 331.3
1873 Female, age 85, both hemispheres 312.2
2045 Male, age 76, both hemispheres 284.9
2082 Female, age 91, right hemisphere 181.2
Hippocampus, CA2
nTPM: 298.2
1963 Male, age 80, left hemisphere 625.2
1892 Male, age 76, both hemispheres 318.3
2437 Female, age 94, left hemisphere 242.3
2113 Female, age 91, right hemisphere 232.3
2249 Male, age 74, both hemispheres 231.7
1940 Female, age 85, left hemisphere 139.4
Hippocampus, CA3
nTPM: 352.5
2137 Male, age 80, left hemisphere 548.1
2861 Female, age 67, both hemispheres 456.9
2620 Female, age 94, left hemisphere 351.3
1867 Male, age 76, both hemispheres 328.4
2436 Male, age 74, both hemispheres 219.9
1891 Female, age 85, both hemispheres 210.3
Parahippocampal cortex
nTPM: 185.1
2245 Female, age 91, both hemispheres 357.1
2018 Male, age 76, both hemispheres 241.5
2250 Female, age 67, right hemisphere 200.4
2622 Female, age 67, right hemisphere 174.9
1933 Female, age 85, both hemispheres 167.2
2692 Male, age 74, both hemispheres 158.7
2693 Female, age 94, both hemispheres 153.8
1990 Female, age 91, right hemisphere 149.3
1850 Male, age 80, both hemispheres 126.7
2532 Female, age 72, left hemisphere 121.7
Perirhinal gyrus
nTPM: 156.0
2521 Female, age 94, right hemisphere 200.6
1847 Female, age 91, left hemisphere 188.6
2848 Male, age 76, right hemisphere 134.6
1794 Male, age 80, right hemisphere 132.9
1841 Female, age 85, right hemisphere 123.5
Subiculum
nTPM: 201.7
2042 Male, age 76, both hemispheres 283.5
1901 Male, age 80, both hemispheres 243.2
2729 Female, age 91, right hemisphere 233.1
2619 Male, age 74, both hemispheres 169.5
1977 Female, age 85, both hemispheres 150.7
2438 Female, age 94, left hemisphere 130.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 496.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 496.8
Samples: 197

Max nTPM: 1702.5
Min nTPM: 44.5
Std nTPM: 344.5
Median nTPM: 403.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 1702.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1678.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1579.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1427.1
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 1309.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1286.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1280.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 1255.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 1252.8
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 1224.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1208.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 349.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 349.5
FF:10153-102I9 76 years, female 398.7
FF:10169-103B7 60 years, female 300.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 245.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 244.3
Samples: 4

Max nTPM: 320.3
Min nTPM: 196.9
Sample A Female 320.3
Sample B Female 251.7
Sample C Male 196.9
Sample D Male 208.4
Entorhinal cortex
nTPM: 146.3
Samples: 4

Max nTPM: 192.4
Min nTPM: 117.8
Sample A Female 144.0
Sample B Female 131.0
Sample C Male 192.4
Sample D Male 117.8
Subiculum
nTPM: 136.0
Samples: 4

Max nTPM: 184.7
Min nTPM: 102.7
Sample A Female 184.7
Sample B Female 122.1
Sample C Male 134.6
Sample D Male 102.7
Ventral hippocampus
nTPM: 245.1
Samples: 4

Max nTPM: 299.8
Min nTPM: 167.4
Sample A Female 229.1
Sample B Female 167.4
Sample C Male 299.8
Sample D Male 283.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 567.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 391.1
Samples: 4

Max nTPM: 454.3
Min nTPM: 350.7
Sample A Male 380.8
Sample B Male 350.7
Sample C Female 454.3
Sample D Female 378.4
Hippocampal formation
nTPM: 567.9
Samples: 4

Max nTPM: 589.0
Min nTPM: 532.7
Sample A Male 576.0
Sample B Male 574.0
Sample C Female 589.0
Sample D Female 532.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
74821712 Antisense, RP_060321_02_C05, Mouse strain C57BL/6J (56 days, male) 14.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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