ABOUTMENU
HELP
NEWS
DPCD
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:37.4 nTPM
HPA:37.4 nTPM
GTEx:36.9 nTPM
FANTOM5:35.0 Scaled Tags Per Million
Pig:46.4 nTPM
Mouse:44.6 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036603Antibody HPA036604
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.4
Sample id Sample description nTPM
Hippocampus
nTPM: 34.1
1898 Male, age 80, left hemisphere 36.0
2621 Female, age 67, right hemisphere 34.7
2148 Female, age 91, left hemisphere 33.9
2529 Female, age 94, left hemisphere 33.7
1855 Male, age 76, left hemisphere 33.6
1911 Female, age 85, right hemisphere 32.7
Dentate gyrus
nTPM: 35.4
2531 Female, age 67, both hemispheres 38.3
1927 Female, age 91, both hemispheres 36.8
2010 Male, age 76, both hemispheres 35.3
2530 Female, age 94, left hemisphere 34.8
2246 Female, age 85, both hemispheres 33.7
2528 Male, age 74, both hemispheres 33.4
Entorhinal gyrus
nTPM: 34.6
2613 Female, age 94, left hemisphere 37.3
2764 Male, age 80, right hemisphere 35.8
2686 Male, age 75, right hemisphere 35.1
1938 Female, age 85, left hemisphere 34.8
1787 Male, age 76, left hemisphere 34.1
2117 Female, age 91, right hemisphere 30.6
Hippocampus, CA1
nTPM: 36.6
2749 Male, age 80, left hemisphere 43.2
2045 Male, age 76, both hemispheres 36.9
2082 Female, age 91, right hemisphere 34.9
2527 Male, age 74, both hemispheres 34.6
1873 Female, age 85, both hemispheres 33.7
Hippocampus, CA2
nTPM: 35.3
1892 Male, age 76, both hemispheres 38.5
1963 Male, age 80, left hemisphere 36.1
2249 Male, age 74, both hemispheres 35.6
1940 Female, age 85, left hemisphere 34.0
2437 Female, age 94, left hemisphere 33.8
2113 Female, age 91, right hemisphere 33.7
Hippocampus, CA3
nTPM: 37.4
2436 Male, age 74, both hemispheres 43.8
2137 Male, age 80, left hemisphere 38.7
2620 Female, age 94, left hemisphere 37.2
1867 Male, age 76, both hemispheres 36.6
2861 Female, age 67, both hemispheres 34.9
1891 Female, age 85, both hemispheres 33.0
Parahippocampal cortex
nTPM: 34.6
2018 Male, age 76, both hemispheres 35.9
2622 Female, age 67, right hemisphere 35.8
2245 Female, age 91, both hemispheres 35.7
1850 Male, age 80, both hemispheres 34.9
2693 Female, age 94, both hemispheres 34.4
1933 Female, age 85, both hemispheres 34.3
2250 Female, age 67, right hemisphere 34.2
1990 Female, age 91, right hemisphere 33.9
2692 Male, age 74, both hemispheres 33.8
2532 Female, age 72, left hemisphere 32.7
Perirhinal gyrus
nTPM: 36.0
1847 Female, age 91, left hemisphere 39.8
1794 Male, age 80, right hemisphere 35.9
2521 Female, age 94, right hemisphere 35.2
1841 Female, age 85, right hemisphere 35.0
2848 Male, age 76, right hemisphere 34.1
Subiculum
nTPM: 35.1
2438 Female, age 94, left hemisphere 40.9
1901 Male, age 80, both hemispheres 36.1
2619 Male, age 74, both hemispheres 35.7
1977 Female, age 85, both hemispheres 34.8
2729 Female, age 91, right hemisphere 31.7
2042 Male, age 76, both hemispheres 31.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.9
Samples: 197

Max nTPM: 92.8
Min nTPM: 11.3
Std nTPM: 12.6
Median nTPM: 34.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 92.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 88.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 77.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 69.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 67.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 67.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 66.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 66.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 65.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 62.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 61.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.0
FF:10169-103B7 60 years, female 38.7
FF:10153-102I9 76 years, female 31.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 46.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 46.5
Samples: 4

Max nTPM: 54.8
Min nTPM: 34.0
Sample A Female 54.8
Sample B Female 43.4
Sample C Male 53.6
Sample D Male 34.0
Entorhinal cortex
nTPM: 44.0
Samples: 4

Max nTPM: 49.0
Min nTPM: 35.7
Sample A Female 45.6
Sample B Female 49.0
Sample C Male 45.6
Sample D Male 35.7
Subiculum
nTPM: 41.4
Samples: 4

Max nTPM: 52.8
Min nTPM: 37.2
Sample A Female 52.8
Sample B Female 37.3
Sample C Male 38.4
Sample D Male 37.2
Ventral hippocampus
nTPM: 40.2
Samples: 4

Max nTPM: 46.2
Min nTPM: 30.5
Sample A Female 38.6
Sample B Female 30.5
Sample C Male 45.5
Sample D Male 46.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.6
Samples: 4

Max nTPM: 50.6
Min nTPM: 41.1
Sample A Male 44.2
Sample B Male 42.4
Sample C Female 41.1
Sample D Female 50.6
Hippocampal formation
nTPM: 43.8
Samples: 4

Max nTPM: 44.8
Min nTPM: 42.0
Sample A Male 44.4
Sample B Male 42.0
Sample C Female 44.8
Sample D Female 43.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
68545527 Antisense, RP_050120_01_B01, Mouse strain C57BL/6J (56 days, male) 8.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.