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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.3 nTPM
HPA:35.3 nTPM
GTEx:47.3 nTPM
FANTOM5:139.6 Scaled Tags Per Million
Pig:114.8 nTPM
Mouse:214.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048321Antibody CAB003843
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.3
Sample id Sample description nTPM
Hippocampus
nTPM: 2.5
1898 Male, age 80, left hemisphere 7.4
1911 Female, age 85, right hemisphere 4.0
1855 Male, age 76, left hemisphere 3.7
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 1.5
1927 Female, age 91, both hemispheres 9.4
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 16.1
2613 Female, age 94, left hemisphere 42.3
2764 Male, age 80, right hemisphere 26.5
1938 Female, age 85, left hemisphere 18.6
1787 Male, age 76, left hemisphere 9.1
2117 Female, age 91, right hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 12.0
2749 Male, age 80, left hemisphere 50.6
2045 Male, age 76, both hemispheres 9.8
1873 Female, age 85, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 1.9
1892 Male, age 76, both hemispheres 11.4
2113 Female, age 91, right hemisphere 0.4
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 16.0
2137 Male, age 80, left hemisphere 83.9
1867 Male, age 76, both hemispheres 12.5
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 17.0
1850 Male, age 80, both hemispheres 40.1
2245 Female, age 91, both hemispheres 32.6
2018 Male, age 76, both hemispheres 21.2
2532 Female, age 72, left hemisphere 20.8
1990 Female, age 91, right hemisphere 18.3
2693 Female, age 94, both hemispheres 14.5
1933 Female, age 85, both hemispheres 10.6
2250 Female, age 67, right hemisphere 7.7
2622 Female, age 67, right hemisphere 3.9
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 35.3
1841 Female, age 85, right hemisphere 42.7
1794 Male, age 80, right hemisphere 42.5
1847 Female, age 91, left hemisphere 39.5
2521 Female, age 94, right hemisphere 30.9
2848 Male, age 76, right hemisphere 20.7
Subiculum
nTPM: 4.6
1901 Male, age 80, both hemispheres 23.9
2042 Male, age 76, both hemispheres 4.0
1977 Female, age 85, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.3
Samples: 197

Max nTPM: 193.9
Min nTPM: 2.4
Std nTPM: 36.2
Median nTPM: 37.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 193.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 155.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 148.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 143.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 137.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 131.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 130.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 129.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 125.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 121.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 120.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 139.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 139.6
FF:10169-103B7 60 years, female 186.2
FF:10153-102I9 76 years, female 93.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 114.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.8
Samples: 4

Max nTPM: 105.5
Min nTPM: 47.7
Sample A Female 89.4
Sample B Female 76.4
Sample C Male 105.5
Sample D Male 47.7
Entorhinal cortex
nTPM: 114.8
Samples: 4

Max nTPM: 119.2
Min nTPM: 112.8
Sample A Female 112.8
Sample B Female 113.0
Sample C Male 119.2
Sample D Male 114.0
Subiculum
nTPM: 74.4
Samples: 4

Max nTPM: 101.1
Min nTPM: 59.4
Sample A Female 101.1
Sample B Female 64.0
Sample C Male 59.4
Sample D Male 73.0
Ventral hippocampus
nTPM: 63.8
Samples: 4

Max nTPM: 102.5
Min nTPM: 40.9
Sample A Female 53.5
Sample B Female 40.9
Sample C Male 58.3
Sample D Male 102.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 214.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 214.9
Samples: 4

Max nTPM: 234.9
Min nTPM: 187.4
Sample A Male 216.7
Sample B Male 220.5
Sample C Female 187.4
Sample D Female 234.9
Hippocampal formation
nTPM: 171.4
Samples: 4

Max nTPM: 182.1
Min nTPM: 149.2
Sample A Male 176.8
Sample B Male 182.1
Sample C Female 177.3
Sample D Female 149.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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