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CIAO2B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:152.9 nTPM
HPA:152.9 nTPM
GTEx:145.4 nTPM
FANTOM5:85.2 Scaled Tags Per Million
Pig:52.1 nTPM
Mouse:20.0 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041501Antibody HPA041736
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 152.9
Sample id Sample description nTPM
Hippocampus
nTPM: 151.1
1898 Male, age 80, left hemisphere 155.5
2529 Female, age 94, left hemisphere 154.1
1855 Male, age 76, left hemisphere 152.4
2148 Female, age 91, left hemisphere 148.7
2621 Female, age 67, right hemisphere 148.2
1911 Female, age 85, right hemisphere 148.1
Dentate gyrus
nTPM: 152.6
2530 Female, age 94, left hemisphere 159.9
2010 Male, age 76, both hemispheres 155.4
2528 Male, age 74, both hemispheres 153.5
2246 Female, age 85, both hemispheres 151.3
1927 Female, age 91, both hemispheres 150.3
2531 Female, age 67, both hemispheres 145.1
Entorhinal gyrus
nTPM: 147.4
2764 Male, age 80, right hemisphere 151.6
2117 Female, age 91, right hemisphere 150.2
1787 Male, age 76, left hemisphere 149.8
1938 Female, age 85, left hemisphere 147.4
2613 Female, age 94, left hemisphere 143.8
2686 Male, age 75, right hemisphere 141.7
Hippocampus, CA1
nTPM: 152.9
2749 Male, age 80, left hemisphere 160.0
2527 Male, age 74, both hemispheres 154.4
2045 Male, age 76, both hemispheres 152.7
1873 Female, age 85, both hemispheres 151.6
2082 Female, age 91, right hemisphere 145.6
Hippocampus, CA2
nTPM: 150.8
1963 Male, age 80, left hemisphere 158.6
2249 Male, age 74, both hemispheres 155.0
1892 Male, age 76, both hemispheres 150.1
2437 Female, age 94, left hemisphere 148.9
1940 Female, age 85, left hemisphere 146.3
2113 Female, age 91, right hemisphere 146.1
Hippocampus, CA3
nTPM: 150.8
2620 Female, age 94, left hemisphere 155.2
2137 Male, age 80, left hemisphere 153.7
2436 Male, age 74, both hemispheres 151.8
1867 Male, age 76, both hemispheres 151.2
1891 Female, age 85, both hemispheres 150.4
2861 Female, age 67, both hemispheres 142.4
Parahippocampal cortex
nTPM: 145.7
2532 Female, age 72, left hemisphere 148.6
1850 Male, age 80, both hemispheres 148.4
2018 Male, age 76, both hemispheres 148.4
2245 Female, age 91, both hemispheres 148.3
1933 Female, age 85, both hemispheres 148.2
1990 Female, age 91, right hemisphere 146.7
2692 Male, age 74, both hemispheres 143.9
2250 Female, age 67, right hemisphere 143.8
2693 Female, age 94, both hemispheres 141.0
2622 Female, age 67, right hemisphere 139.4
Perirhinal gyrus
nTPM: 146.3
1794 Male, age 80, right hemisphere 149.9
1847 Female, age 91, left hemisphere 147.4
2521 Female, age 94, right hemisphere 146.3
1841 Female, age 85, right hemisphere 145.3
2848 Male, age 76, right hemisphere 142.5
Subiculum
nTPM: 149.0
1901 Male, age 80, both hemispheres 155.4
1977 Female, age 85, both hemispheres 151.1
2042 Male, age 76, both hemispheres 148.7
2619 Male, age 74, both hemispheres 146.8
2438 Female, age 94, left hemisphere 146.6
2729 Female, age 91, right hemisphere 145.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 145.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 145.4
Samples: 197

Max nTPM: 273.3
Min nTPM: 69.2
Std nTPM: 31.2
Median nTPM: 141.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 273.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 272.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 249.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 231.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 229.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 225.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 222.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 215.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 210.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 209.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 199.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 85.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 85.2
FF:10169-103B7 60 years, female 95.2
FF:10153-102I9 76 years, female 75.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 52.1
Samples: 4

Max nTPM: 66.8
Min nTPM: 42.7
Sample A Female 66.8
Sample B Female 53.0
Sample C Male 42.7
Sample D Male 45.7
Entorhinal cortex
nTPM: 40.2
Samples: 4

Max nTPM: 47.9
Min nTPM: 32.5
Sample A Female 40.5
Sample B Female 47.9
Sample C Male 40.0
Sample D Male 32.5
Subiculum
nTPM: 38.1
Samples: 4

Max nTPM: 49.6
Min nTPM: 32.1
Sample A Female 49.6
Sample B Female 36.1
Sample C Male 32.1
Sample D Male 34.4
Ventral hippocampus
nTPM: 45.3
Samples: 4

Max nTPM: 52.2
Min nTPM: 38.9
Sample A Female 41.9
Sample B Female 38.9
Sample C Male 48.0
Sample D Male 52.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.6
Samples: 4

Max nTPM: 20.7
Min nTPM: 18.3
Sample A Male 19.0
Sample B Male 20.7
Sample C Female 20.2
Sample D Female 18.3
Hippocampal formation
nTPM: 20.0
Samples: 4

Max nTPM: 23.9
Min nTPM: 17.0
Sample A Male 23.9
Sample B Male 17.0
Sample C Female 19.1
Sample D Female 19.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
69838600 Antisense, RP_050310_02_B08, Mouse strain C57BL/6J (56 days, male) 3.1
74819685 Antisense, RP_060315_02_H01, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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